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13_1_40cm_scaffold_1719

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1719_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2..865
DNA (864bp) protein (288aa)
malate/L-lactate dehydrogenase; K13574 uncharacterized oxidoreductase [EC:1.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
malate dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI0003181A27
malate/L-lactate dehydrogenase
13_1_40cm_scaffold_1719_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

865..1089
DNA (225bp) protein (75aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4998222 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_1719_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1086..2375
DNA (1290bp) protein (430aa)
amino acid transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Amino acid/polyamine/organocation transporter, APC superfamily id=4998223 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid transporter
13_1_40cm_scaffold_1719_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2389..3360
DNA (972bp) protein (324aa)
magnesium and cobalt transport protein CorA; K03284 magnesium transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
magnesium and cobalt transport protein CorA; K03284 magnesium transporter id=14626346 bin=bin7_NC10_sister species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=bin7_NC10_sister organism_group=NC10
magnesium and cobalt transport protein CorA
13_1_40cm_scaffold_1719_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3456..3842)
DNA (387bp) protein (129aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=4998224 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1719_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3839..4711)
DNA (873bp) protein (291aa)
Putative uncharacterized protein id=4998225 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_1719_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4839..5462
DNA (624bp) protein (208aa)
organic solvent tolerance ABC transporter, periplasmic substrate-binding protein; K07323 putative toluene tolerance protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Organic solvent tolerance ABC transporter, periplasmic substrate-binding protein id=4998226 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_1719_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

5493..7016
DNA (1524bp) protein (508aa)
sodium solute transporter superfamily protein id=14627648 bin=bin7_NC10_sister species=Coraliomargarita akajimensis genus=Coraliomargarita taxon_order=Puniceicoccales taxon_class=Opitutae phylum=Verrucomicrobia tax=bin7_NC10_sister organism_group=NC10
sodium solute transporter superfamily protein Tax=CSP1_6_Rokubacteria
sodium solute transporter superfamily protein
13_1_40cm_scaffold_1719_9
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6997..8136)
DNA (1140bp) protein (380aa)
Putative fatty-acid--CoA ligase {ECO:0000313|EMBL:CAM06112.1}; EC=6.2.1.- {ECO:0000313|EMBL:CAM06112.1};; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Sacchar
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI000375F3C6
hypothetical protein
13_1_40cm_scaffold_1719_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8443..9921)
DNA (1479bp) protein (493aa)
beta-N-acetylglucosaminidase; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl hydrolase domain protein id=4788498 bin=GWC2_Methylomirabilis_70_16 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
beta-glucosidase
13_1_40cm_scaffold_1719_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10190..10729
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI0003764836
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_scaffold_1719_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10858..11205
DNA (348bp) protein (116aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
id=3877521 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_1719_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11326..12366)
DNA (1041bp) protein (347aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterised conserved protein UCP016719 id=4143370 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_1719_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12398..13327
DNA (930bp) protein (310aa)
murQ; N-acetylmuramic acid 6-phosphate etherase; K07106 N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] Tax=GWA2_Rokubacteria_73_35_curated
N-acetylmuramic acid 6-phosphate etherase id=3431007 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_1719_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13290..13889)
DNA (600bp) protein (200aa)
MOSC domain containing protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QK31_CATAD
MOSC domain-containing protein; K07140 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
MOSC domain-containing protein
13_1_40cm_scaffold_1719_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13977..15710)
DNA (1734bp) protein (578aa)
dihydroxyacid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dihydroxyacid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase id=3431010 bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium CSLF43 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1719_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

15757..16554
DNA (798bp) protein (266aa)
Uncharacterized protein id=3068161 bin=GWC2_Methylomirabilis_70_16 species=Pseudomonas sp. GM50 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
short-chain dehydrogenase/reductase SDR Tax=GWC2_Rokubacteria_70_16_curated
dehydrogenase
13_1_40cm_scaffold_1719_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16724..17902
DNA (1179bp) protein (393aa)
acyl-CoA dehydrogenase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Acyl-CoA dehydrogenase domain protein id=4485927 bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
acyl-CoA dehydrogenase domain-containing protein
13_1_40cm_scaffold_1719_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

17905..18687
DNA (783bp) protein (261aa)
enoyl-CoA hydratase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Enoyl-CoA hydratase/isomerase family protein id=3068152 bin=GWC2_Methylomirabilis_70_16 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
enoyl-CoA hydratase/isomerase
13_1_40cm_scaffold_1719_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18835..19341
DNA (507bp) protein (169aa)
id=4885132 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=14625322 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_1719_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(19342..19920)
DNA (579bp) protein (193aa)
ThiJ/PfpI domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ThiJ/PfpI domain-containing protein id=14625351 bin=bin7_NC10_sister species=Bacillus methanolicus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
ThiJ/PfpI domain-containing protein
13_1_40cm_scaffold_1719_22
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(19917..20612)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TCE3_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH89960.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
hypothetical protein
13_1_40cm_scaffold_1719_23
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(20614..21042)
DNA (429bp) protein (143aa)
carbonic anhydrase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
siderophore-binding protein id=4485938 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
carbonic anhydrase
13_1_40cm_scaffold_1719_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21113..22138
DNA (1026bp) protein (342aa)
Chalcone and stilbene synthase domain protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Chalcone and stilbene synthase domain protein id=14627397 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Chalcone and stilbene synthase domain protein
13_1_40cm_scaffold_1719_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

22377..23045
DNA (669bp) protein (223aa)
SAM-dependent methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
type 11 methyltransferase id=14627396 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
methyltransferase type 11
13_1_40cm_scaffold_1719_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

23042..24238
DNA (1197bp) protein (399aa)
Electron transfer oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Electron transfer oxidoreductase id=4485942 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Electron transfer oxidoreductase
13_1_40cm_scaffold_1719_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

24278..24943
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EA8FE3
dimethylmenaquinone methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dimethylmenaquinone methyltransferase
13_1_40cm_scaffold_1719_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(25078..26466)
DNA (1389bp) protein (463aa)
peptidase M23 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidase M23 id=4485944 bin=GWC2_Methylomirabilis_70_24 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
peptidase M23
13_1_40cm_scaffold_1719_29
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

26751..29012
DNA (2262bp) protein (754aa)
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
Putative uncharacterized protein id=2961852 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Accumulibacter phosphatis genus=Candidatus Accumulibacter taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
tetratricopeptide repeat domain protein
13_1_40cm_scaffold_1719_30
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

29006..30718
DNA (1713bp) protein (571aa)
guanylate cyclase id=14627487 bin=bin7_NC10_sister species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
guanylate cyclase Tax=CSP1_6_Rokubacteria
guanylate cyclase
Displaying items 1-30 of 32 in total

View Taxonomy