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13_1_40cm_scaffold_221

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_221_1
unknown

Not on your lists

217..483
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_scaffold_221_2
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(707..1750)
DNA (1044bp) protein (348aa)
Blr0521 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89X06_BRADU
hypothetical protein
Blr0521 protein {ECO:0000313|EMBL:BAC45786.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoeffici
13_1_40cm_scaffold_221_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1906..2616)
DNA (711bp) protein (237aa)
Branched-chain amino acid ABC transporter,ATP-binding component (LivF-like) id=5022299 bin=GWA2_Methylomirabilis_73_35 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain amino acid ABC transporter,ATP-binding component (LivF-like) Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter ATP-binding protein
13_1_40cm_scaffold_221_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2613..3368)
DNA (756bp) protein (252aa)
Branched-chain amino acid ABC transporter ATP-binding protein id=5022300 bin=GWA2_Methylomirabilis_73_35 species=Haloferax denitrificans genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
livG3; branched-chain amino acid ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
livG-3; branched-chain amino acid ABC transporter ATP-binding protein
13_1_40cm_scaffold_221_5
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(3371..4369)
DNA (999bp) protein (333aa)
Inner-membrane translocator id=5022301 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
branched-chain amino acid ABC transporter permease
13_1_40cm_scaffold_221_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4389..5264)
DNA (876bp) protein (292aa)
Inner-membrane translocator id=5022302 bin=GWA2_Methylomirabilis_73_35 species=Thermus sp. CCB_US3_UF1 genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
inner-membrane translocator
13_1_40cm_scaffold_221_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5279..7510)
DNA (2232bp) protein (744aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative uncharacterized protein id=14625570 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacillariophyta tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_221_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7632..8999)
DNA (1368bp) protein (456aa)
Extracellular ligand-binding receptor id=5022303 bin=GWA2_Methylomirabilis_73_35 species=Haloferax denitrificans genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched chain amino acid ABC transporter substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
branched chain amino acid ABC transporter substrate-binding protein
13_1_40cm_scaffold_221_9
R_NC10_66_22, NC10, Bacteria

Not on your lists

9153..9869
DNA (717bp) protein (239aa)
id=14625572 Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
id=14625572 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_221_10
unknown

Not on your lists

comp(9823..9939)
DNA (117bp) protein (39aa)

This feature has no annotations

13_1_40cm_scaffold_221_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10226..10633
DNA (408bp) protein (136aa)
Polysaccharide deacetylase id=3955121 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
polysaccharide deacetylase Tax=GWA2_Rokubacteria_73_35_curated
polysaccharide deacetylase
13_1_40cm_scaffold_221_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10634..10810)
DNA (177bp) protein (59aa)
Integral membrane protein DUF6 n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKG5_CHLTF
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_221_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10777..10962)
DNA (186bp) protein (62aa)
Membrane protein, putative id=3955119 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_40cm_scaffold_221_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10962..11387)
DNA (426bp) protein (142aa)
id=3870377 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=2980061 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_221_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11384..11800)
DNA (417bp) protein (139aa)
id=3870377 Tax=GWA2_Rokubacteria_73_35_curated
id=3870377 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_221_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11814..12410)
DNA (597bp) protein (199aa)
ABC-type antimicrobial peptide transport system, ATPase component id=3955117 bin=GWA2_Methylomirabilis_73_35 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter ATP-binding protein
13_1_40cm_scaffold_221_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12410..13576)
DNA (1167bp) protein (389aa)
ABC transporter permease; K02004 putative ABC transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
Putative ABC transporter permease protein id=3955116 bin=GWA2_Methylomirabilis_73_35 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease
13_1_40cm_scaffold_221_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(13697..14968)
DNA (1272bp) protein (424aa)
monooxygenase FAD-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Flavin-dependent dehydrogenase id=2980067 bin=GWC2_Methylomirabilis_70_16 species=Xanthomonas gardneri genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
monooxygenase FAD-binding protein
13_1_40cm_scaffold_221_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14965..16044)
DNA (1080bp) protein (360aa)
cell wall biogenesis glycosyltransferase (EC:2.4.-.-)
glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyltransferase involved in cell wall biogenesis id=3870373 bin=GWF2_Methylomirabilis_70_14 species=Granulibacter bethesdensis genus=Granulibacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_221_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(16041..17057)
DNA (1017bp) protein (339aa)
beta-ketoacyl-acyl-carrier-protein synthase II (EC:2.3.1.179); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Beta-ketoacyl synthase id=3870372 bin=GWF2_Methylomirabilis_70_14 species=Thermomonospora curvata genus=Thermomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
AuaD protein
13_1_40cm_scaffold_221_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(17054..18232)
DNA (1179bp) protein (393aa)
Beta-ketoacyl synthase; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=GWA2_Rokubacteria_70_23_curated
fabF; 3-oxoacyl-ACP synthase (EC:2.3.1.41)
Beta-ketoacyl synthase id=3713926 bin=GWC2_Methylomirabilis_70_16 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_221_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(18229..18504)
DNA (276bp) protein (92aa)
hypothetical protein; K02078 acyl carrier protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein; K02078 acyl carrier protein id=14627962 bin=bin7_NC10_sister species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_221_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(18512..19303)
DNA (792bp) protein (264aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
beta-ketoacyl synthase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Probable 3-oxoacyl-[acyl-carrier-protein] synthase II id=3713929 bin=GWC2_Methylomirabilis_70_16 species=Streptomyces violaceusniger genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_221_24
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(19300..20487)
DNA (1188bp) protein (396aa)
Beta-ketoacyl synthase; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 id=3713931 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_221_25
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(20459..21388)
DNA (930bp) protein (310aa)
Lauroyl/myristoyl acyltransferase (EC:2.3.1.-) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Lipid A biosynthesis acyltransferase id=4785123 bin=GWC2_Methylomirabilis_70_24 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
lipid A biosynthesis acyltransferase
13_1_40cm_scaffold_221_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(21388..22173)
DNA (786bp) protein (262aa)
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=14627958 bin=bin7_NC10_sister species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_221_27
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

22189..23217
DNA (1029bp) protein (343aa)
dihydroorotate dehydrogenase (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
pyrD; Dihydroorotate dehydrogenase (quinone) (EC:1.3.5.2)
Dihydroorotate dehydrogenase (quinone) id=4430352 bin=GWC2_Methylomirabilis_70_24 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_scaffold_221_28
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

23621..23863
DNA (243bp) protein (81aa)
id=4430353 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
id=4430353 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_scaffold_221_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(23870..24322)
DNA (453bp) protein (151aa)
putative glyoxalase; K07104 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative glyoxalase; K07104 id=14627931 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
putative glyoxalase
13_1_40cm_scaffold_221_30
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(24361..25029)
DNA (669bp) protein (223aa)
DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
DNA repair protein RadC; K03630 DNA repair protein RadC id=14627930 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=bin7_NC10_sister organism_group=NC10
DNA repair protein RadC
Displaying items 1-30 of 39 in total

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