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13_1_40cm_scaffold_2248

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2248_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1..909)
DNA (909bp) protein (303aa)
phosphorylase, carbohydrate binding; K13688 cyclic beta-1,2-glucan synthetase [EC:2.4.1.-] Tax=GWA2_Rokubacteria_70_23_curated
Cellobiose phosphorylase id=3639820 bin=GWF2_Methylomirabilis_70_14 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative cyclic beta 1-2 glucan synthetase
13_1_40cm_scaffold_2248_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1286..1819)
DNA (534bp) protein (178aa)
id=3938572 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=14627830 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_2248_3
Cyanobium sp. CACIAM 14, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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1891..2151
DNA (261bp) protein (87aa)
Membrane protein {ECO:0000313|EMBL:KEF42812.1}; TaxID=1496688 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobium.;" source="Cyanobium sp. CACIAM 14.;"
13_1_40cm_scaffold_2248_4
unknown

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2216..2341
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_scaffold_2248_5
unknown

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2341..2586
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_scaffold_2248_6
unknown

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2610..2753
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_40cm_scaffold_2248_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(2808..3539)
DNA (732bp) protein (244aa)
rluD_3; ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
RNA pseudouridylate synthase id=1890952 bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RluA family pseudouridine synthase
13_1_40cm_scaffold_2248_8
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(3639..4058)
DNA (420bp) protein (140aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ABA19988.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABA19988.1};; TaxID=240292 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" so
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3MG98_ANAVT
13_1_40cm_scaffold_2248_9
RBG_16_Chloroflexi_58_14_curated, Chloroflexi, Bacteria

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4183..5799
DNA (1617bp) protein (539aa)
amino acid permease family protein Tax=RBG_16_Chloroflexi_58_14_curated
Amino acid transporter id=2876962 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
amino acid permease
13_1_40cm_scaffold_2248_10
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(5800..6321)
DNA (522bp) protein (174aa)
chromate transport protein
Chromate transporter id=1948318 bin=GWE2_Bacteroidetes_40_15 species=unknown genus=Maribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
Tax=BJP_08E140C01_Bacteroidetes_41_49
13_1_40cm_scaffold_2248_11
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6318..6851)
DNA (534bp) protein (178aa)
Chromate transporter n=1 Tax=Paenibacillus mucilaginosus (strain KNP414) RepID=F8FMR9_PAEMK
chromate transporter
Chromate transporter {ECO:0000313|EMBL:AEI44240.1}; TaxID=1036673 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus (strain KNP
13_1_40cm_scaffold_2248_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6848..7984)
DNA (1137bp) protein (379aa)
L-carnitine dehydratase/bile acid-inducible protein F id=4412851 bin=GWF2_Methylomirabilis_70_14 species=Streptomyces ghanaensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
yfdE; L-carnitine dehydratase/bile acid-inducible protein F Tax=GWA2_Rokubacteria_70_23_curated
L-carnitine dehydratase/bile acid-inducible protein F
13_1_40cm_scaffold_2248_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7981..8835)
DNA (855bp) protein (285aa)
acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=GWC2_Rokubacteria_70_16_curated
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Acyl-CoA dehydrogenase id=4412861 bin=GWF2_Methylomirabilis_70_14 species=Phyllobacterium sp. YR531 genus=Phyllobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 13 items

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