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13_1_40cm_scaffold_227

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_227_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

1..768
DNA (768bp) protein (256aa)
Ornithine cyclodeaminase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UQ2_SOLUE
ornithine cyclodeaminase/mu-crystallin
Ornithine cyclodeaminase/mu-crystallin {ECO:0000313|EMBL:AHG88911.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_227_2
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

793..2043
DNA (1251bp) protein (417aa)
Transporter, chromate ion transporter (CHR) family n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JM15_SYNJB
Uncharacterized protein {ECO:0000313|EMBL:ETX06016.1}; Flags: Fragment;; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
chromate transporter
13_1_40cm_scaffold_227_3

Not on your lists

2043..2969
DNA (927bp) protein (309aa)
Uncharacterized protein n=2 Tax=mine drainage metagenome RepID=T1BUI5_9ZZZZ
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49146.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
40-residue YVTN family beta-propeller repeat-containing protein
13_1_40cm_scaffold_227_4
R_Omnitrophica_45_10b, Omnitrophica, Bacteria

Not on your lists

2966..3985
DNA (1020bp) protein (340aa)
cation efflux family protein id=14632868 bin=bin9_gal15 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin9_gal15 organism_group=GAL15
cation efflux family protein
Tax=RIFCSPLOWO2_01_FULL_Omnitrophica_45_10b_curated
13_1_40cm_scaffold_227_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4062..5000
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E3C317
cyclase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
cyclase
13_1_40cm_scaffold_227_6
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4993..5931)
DNA (939bp) protein (313aa)
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KQB2_9SYNC
TRAP-type C4-dicarboxylate transport system,periplasmic component Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ABC transporter substrate-binding protein
13_1_40cm_scaffold_227_7
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5939..6865)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJX9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:ETW95583.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase
13_1_40cm_scaffold_227_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6957..8249
DNA (1293bp) protein (431aa)
Dihydroxy-acid dehydratase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1II83_9BRAD
LuxA {ECO:0000313|EMBL:ETW92933.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
LuxA-like protein
13_1_40cm_scaffold_227_9
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8188..8571
DNA (384bp) protein (128aa)
NMT1/THI5 like domain protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U8E0_METS4
NMT1/THI5-like domain-containing protein
NMT1/THI5 like domain protein {ECO:0000313|EMBL:ACA15323.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.
13_1_40cm_scaffold_227_10
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(8596..9066)
DNA (471bp) protein (157aa)
id=14625994 Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
13_1_40cm_scaffold_227_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9063..9443)
DNA (381bp) protein (127aa)
proline-rich region Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=3160383 bin=GWA2_OP3_53_43 species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
hypothetical protein
13_1_40cm_scaffold_227_12
unknown

Not on your lists

9535..9711
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_40cm_scaffold_227_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9718..10485)
DNA (768bp) protein (256aa)
3-oxoacyl-(acyl-carrier-protein) reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
fabG; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier protein) reductase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F4I8_9RHIZ
13_1_40cm_scaffold_227_14
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(10482..11093)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037FA060
hypothetical protein; K06889 Tax=RBG_16_Acidobacteria_68_9_curated
hypothetical protein
13_1_40cm_scaffold_227_15
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(11090..11314)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037FA060
hypothetical protein; K06889 Tax=RBG_16_Acidobacteria_68_9_curated
biotin/lipoyl attachment domain-containing protein
13_1_40cm_scaffold_227_16
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11446..12648
DNA (1203bp) protein (401aa)
amidohydrolase 2 Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Amidohydrolase 2 id=3780588 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidohydrolase 2
13_1_40cm_scaffold_227_17
unknown

Not on your lists

comp(12653..12832)
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_40cm_scaffold_227_18
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(13027..13992)
DNA (966bp) protein (322aa)
Taurine catabolism dioxygenase tauD/tfdA n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UGA6_ADVKW
taurine catabolism dioxygenase tauD/tfdA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
taurine catabolism dioxygenase tauD/tfdA rbh
13_1_40cm_scaffold_227_19
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

14104..15471
DNA (1368bp) protein (456aa)
allantoinase n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00037E630C
dihydroorotase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
dihydroorotase
13_1_40cm_scaffold_227_20
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15468..16007
DNA (540bp) protein (180aa)
C4-dicarboxylate transport system (Permease small protein) n=1 Tax=Clostridium sp. CAG:58 RepID=R6RAG9_9CLOT
C4-dicarboxylate transport system (Permease small protein) {ECO:0000313|EMBL:CDC45908.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environme
ABC transporter
13_1_40cm_scaffold_227_21
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

15953..17299
DNA (1347bp) protein (449aa)
C4-dicarboxylate TRAP-T family tripartite ATP-independent periplasmic transporter, membrane protein id=4547896 bin=GWC2_Methylomirabilis_70_16 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
C4-dicarboxylate ABC transporter permease Tax=GWC2_Rokubacteria_70_16_curated
TRAP-type C4-dicarboxylate transport system, large permease component
13_1_40cm_scaffold_227_22
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17372..18364
DNA (993bp) protein (331aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q129B5_POLSJ
TRAP dicarboxylate transporter subunit DctP
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:ABE44877.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Pola
13_1_40cm_scaffold_227_23
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18366..20462
DNA (2097bp) protein (699aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036E3381
Uncharacterized protein {ECO:0000313|EMBL:ETX02452.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
5-oxoprolinase
13_1_40cm_scaffold_227_24
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20467..22251
DNA (1785bp) protein (595aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037399BB
Uncharacterized protein {ECO:0000313|EMBL:ETX02451.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
5-oxoprolinase
13_1_40cm_scaffold_227_25
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

22254..23111
DNA (858bp) protein (286aa)
Putative NHL repeat protein id=3749658 bin=GWC2_Methylomirabilis_70_16 species=uncultured marine microorganism HF4000_010I05 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
NHL repeat-containing protein Tax=GWC2_Rokubacteria_70_16_curated
NHL repeat family protein
13_1_40cm_scaffold_227_26
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23217..26030
DNA (2814bp) protein (938aa)
formyl-CoA transferase n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI0003736D51
thiamine pyrophosphate protein Tax=RBG_13_Deltaproteobacteria_52_11b_curated
formyl-CoA transferase
13_1_40cm_scaffold_227_27
unknown

Not on your lists

comp(26097..26363)
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_scaffold_227_28
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27207..27671)
DNA (465bp) protein (155aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00
Ribonuclease H n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I5L6_DESAP
ribonuclease H
13_1_40cm_scaffold_227_29
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(27668..28372)
DNA (705bp) protein (235aa)
Uncharacterized protein id=4948641 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_1_40cm_scaffold_227_trna_1
unknown

Not on your lists

comp(28392..28463)
DNA (72bp)
transferRNA
Displaying items 1-30 of 36 in total

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