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13_1_40cm_scaffold_2352

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2352_1
R_NC10_66_22, NC10, Bacteria

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comp(3..1010)
DNA (1008bp) protein (336aa)
major facilitator superfamily permease Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Sugar phosphate permease id=3841412 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_40cm_scaffold_2352_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1148..2089)
DNA (942bp) protein (314aa)
WD40-like beta Propeller containing protein
WD40-like beta Propeller containing protein {ECO:0000313|EMBL:AHG87851.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_2352_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2124..2672)
DNA (549bp) protein (183aa)
Uncharacterized protein id=4219880 bin=GWA2_Methylomirabilis_73_35 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
cation/multidrug efflux pump
13_1_40cm_scaffold_2352_4
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2721..3227)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000361E4F4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXI89217.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
13_1_40cm_scaffold_2352_5

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comp(3227..4414)
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000363B4E1
CoA-transferase family III {ECO:0000313|EMBL:AIA10953.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
formyl-CoA transferase
13_1_40cm_scaffold_2352_6
unknown

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comp(4546..5346)
DNA (801bp) protein (267aa)

This feature has no annotations

13_1_40cm_scaffold_2352_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5523..6128
DNA (606bp) protein (202aa)
Putative uncharacterized protein id=4219881 bin=GWA2_Methylomirabilis_73_35 species=Clostridium hathewayi genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_2352_8
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6551..7393)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00036FC031
Bacterial regulatory, luxR family protein {ECO:0000313|EMBL:AID31308.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="
sensory transduction histidine kinase
13_1_40cm_scaffold_2352_9
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7466..8437)
DNA (972bp) protein (324aa)
Polysaccharide deacetylase n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZHV4_ROSLO
Chitin deacetylase {ECO:0000313|EMBL:KJC54109.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTS
polysaccharide deacetylase
13_1_40cm_scaffold_2352_10
Roseobacter litoralis, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9003..9821)
DNA (819bp) protein (273aa)
Putative ABC transporter permease protein n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZHV3_ROSLO
ABC transporter permease
Putative ABC transporter permease protein {ECO:0000313|EMBL:AEI93713.1}; TaxID=391595 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="
13_1_40cm_scaffold_2352_11
Roseobacter litoralis, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9824..10660)
DNA (837bp) protein (279aa)
Putative ABC transporter permease protein n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZHV2_ROSLO
ABC transporter permease
Putative ABC transporter permease protein {ECO:0000313|EMBL:AEI93712.1}; TaxID=391595 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="
13_1_40cm_scaffold_2352_12
Roseobacter litoralis, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10657..11643)
DNA (987bp) protein (329aa)
ABC transporter, substrate-binding protein, putative n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q166U8_ROSDO
ABC transporter substrate-binding protein
Putative ABC transporter substrate binding protein {ECO:0000313|EMBL:AEI93711.1}; TaxID=391595 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;"
13_1_40cm_scaffold_2352_13
Roseobacter litoralis, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11656..12612)
DNA (957bp) protein (319aa)
ABC transporter ATP-binding protein n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZHV0_ROSLO
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AEI93710.1}; TaxID=391595 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseob
Displaying 13 items

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