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13_1_40cm_scaffold_240

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_240_1
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(1..261)
DNA (261bp) protein (87aa)
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] id=14627498 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
cytochrome C oxidase
13_1_40cm_scaffold_240_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(278..934)
DNA (657bp) protein (219aa)
cytochrome c oxidase, subunit II Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
cytochrome c oxidase, subunit II id=14627499 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
cytochrome c oxidase, subunit II
13_1_40cm_scaffold_240_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(941..1639)
DNA (699bp) protein (233aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Uncharacterized protein id=4083686 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_240_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1666..3111)
DNA (1446bp) protein (482aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Hypothetical (Diheme) protein id=4083687 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative cytochrome c
13_1_40cm_scaffold_240_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3098..3859)
DNA (762bp) protein (254aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative (Diheme) protein id=4083690 bin=GWA2_Methylomirabilis_73_35 species=endosymbiont of Tevnia jerichonana genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_240_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3863..4660)
DNA (798bp) protein (266aa)
cyhA; 18 kda cytochrome c553 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Hypothetical (Diheme) protein id=4083692 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_240_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4661..6355)
DNA (1695bp) protein (565aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4083694 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_240_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6548..8455
DNA (1908bp) protein (636aa)
ftsH; cell division protein FtsH (EC:3.4.24.-) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ftsH; cell division protein FtsH (EC:3.4.24.-) id=14627774 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ftsH; cell division protein FtsH (EC:3.4.24.-)
13_1_40cm_scaffold_240_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8452..9924
DNA (1473bp) protein (491aa)
peptidase S1C, Do; K01362 [EC:3.4.21.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
trypsin domain/PDZ domain-containing protein; K01362 [EC:3.4.21.-] id=14627773 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
degP-2; periplasmic trypsin-like serine protease lipoprotein DegP
13_1_40cm_scaffold_240_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10037..10777
DNA (741bp) protein (247aa)
Endoribonuclease L-PSP n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6R6_NITMU
endoribonuclease L-PSP
endoribonuclease L-PSP Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
13_1_40cm_scaffold_240_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10898..11959
DNA (1062bp) protein (354aa)
chaperone DnaJ domain-containing protein; K03686 molecular chaperone DnaJ Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Chaperone protein DnaJ id=4428160 bin=GWC2_Methylomirabilis_70_24 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
chaperone DnaJ domain-containing protein
13_1_40cm_scaffold_240_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11972..14575
DNA (2604bp) protein (868aa)
ClpA; ATPase with chaperone activity, ATP-binding subunit; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ClpA; ATPase with chaperone activity, ATP-binding subunit; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB id=14628005 bin=bin7_NC10_sister species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin7_NC10_sister organism_group=NC10
ATP-dependent chaperone ClpB
13_1_40cm_scaffold_240_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14612..15889
DNA (1278bp) protein (426aa)
Major facilitator superfamily MFS_1 id=2304903 bin=GWA2_Methylomirabilis_73_35 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sugar phosphate permease Tax=GWA2_Rokubacteria_73_35_curated
major facilitator superfamily protein
13_1_40cm_scaffold_240_14
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15906..16775
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4561
Uncharacterized protein {ECO:0000313|EMBL:EAQ81818.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula m
13_1_40cm_scaffold_240_15
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

16858..18153
DNA (1296bp) protein (432aa)
Extracellular solute-binding protein family 1 n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZ82_STAND
family 1 extracellular solute-binding protein Tax=RBG_16_NC10_65_8_curated
family 1 extracellular solute-binding protein
13_1_40cm_scaffold_240_16
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

18198..19052
DNA (855bp) protein (285aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZ81_STAND
binding-protein-dependent transporters inner membrane component; K02025 multiple sugar transport system permease protein Tax=RBG_16_NC10_65_8_curated
binding-protein-dependent transporters inner membrane component
13_1_40cm_scaffold_240_17
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

19049..19849
DNA (801bp) protein (267aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZ80_STAND
binding-protein-dependent transporters inner membrane component Tax=RBG_16_NC10_65_8_curated
binding-protein-dependent transporters inner membrane component
13_1_40cm_scaffold_240_18
unknown

Not on your lists

19859..20176
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_40cm_scaffold_240_19
unknown

Not on your lists

20272..20367
DNA (96bp) protein (32aa)

This feature has no annotations

13_1_40cm_scaffold_240_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20376..21119
DNA (744bp) protein (248aa)
Integral membrane protein TerC n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DC43_9BACT
integral membrane protein TerC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
YjbE family integral membrane protein
13_1_40cm_scaffold_240_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(21116..22861)
DNA (1746bp) protein (582aa)
gamma-glutamyltranspeptidase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative gamma-glutamyltranspeptidase id=2304933 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gamma-glutamyltranspeptidase
13_1_40cm_scaffold_240_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

22886..23617
DNA (732bp) protein (244aa)
peptidase C26; K07010 putative glutamine amidotransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidase C26 id=2304934 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase C26
13_1_40cm_scaffold_240_23
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(23752..24018)
DNA (267bp) protein (89aa)
Tax=RBG_16_Planctomycetes_64_12_curated
13_1_40cm_scaffold_240_24
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

24409..26073
DNA (1665bp) protein (555aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI0003782528
Fis family NifA subfamily transcriptional regulator Tax=RBG_16_NC10_65_8_curated
Fis family transcriptional regulator
13_1_40cm_scaffold_240_25
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26162..27418)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JH36_BURP8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY43675.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri
13_1_40cm_scaffold_240_26
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(27418..27993)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UCT2_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:KDA53246.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
hypothetical protein
13_1_40cm_scaffold_240_27
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28056..28445)
DNA (390bp) protein (130aa)
Arylsulfatase (EC:3.1.6.1)
Arylsulfatase A family protein n=1 Tax=Rhizobium sp. CF142 RepID=J2AWR2_9RHIZ
Arylsulfatase {ECO:0000313|EMBL:CDH45059.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter od
13_1_40cm_scaffold_240_28
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28571..29725)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CEQ9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIM94377.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terr
hypothetical protein
Displaying 28 items

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