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13_1_40cm_scaffold_2405

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2405_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(1..1743)
DNA (1743bp) protein (581aa)
agmatinase; K01480 agmatinase [EC:3.5.3.11] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative protease/transporter id=5010016 bin=GWA2_Methylomirabilis_73_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
membrane-bound serine protease
13_1_40cm_scaffold_2405_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1744..2961)
DNA (1218bp) protein (406aa)
SufS subfamily cysteine desulfurase (EC:4.4.1.16); K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] Tax=GWA2_Rokubacteria_73_35_curated
cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase id=5010015 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_2405_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2958..3350)
DNA (393bp) protein (131aa)
SUF system FeS assembly protein id=5010014 bin=GWA2_Methylomirabilis_73_35 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
SUF system FeS assembly protein; K04488 nitrogen fixation protein NifU and related proteins Tax=GWA2_Rokubacteria_73_35_curated
NifU family SUF system FeS assembly protein
13_1_40cm_scaffold_2405_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3469..4509)
DNA (1041bp) protein (347aa)
molybdopterin binding domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Molybdopterin binding domain-containing protein id=5010013 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin binding domain-containing protein
13_1_40cm_scaffold_2405_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4506..5555)
DNA (1050bp) protein (350aa)
Putative uncharacterized protein id=5010012 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein; K07402 xanthine dehydrogenase accessory factor Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_2405_6
unknown

Not on your lists

comp(5620..5901)
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_40cm_scaffold_2405_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6074..7186)
DNA (1113bp) protein (371aa)
VWA domain containing CoxE-like protein id=5010011 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
VWA domain containing CoxE-like protein; K07161 Tax=GWA2_Rokubacteria_73_35_curated
VWA containing CoxE family protein
13_1_40cm_scaffold_2405_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7216..8109)
DNA (894bp) protein (298aa)
ATPase AAA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ATPase associated with various cellular activities AAA_5 id=5010010 bin=GWA2_Methylomirabilis_73_35 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ATPase associated with various cellular activities AAA_5
13_1_40cm_scaffold_2405_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8116..8676)
DNA (561bp) protein (187aa)
MobA-like protein; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Molybdenum cofactor cytidylyltransferase id=5010009 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MobA-like protein
13_1_40cm_scaffold_2405_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8688..10940)
DNA (2253bp) protein (751aa)
family 2 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Glycosyltransferase id=2319272 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 2 glycosyl transferase
13_1_40cm_scaffold_2405_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11034..12941
DNA (1908bp) protein (636aa)
Asparagine synthetase id=4814774 bin=GWC2_Methylomirabilis_70_16 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
asparagine synthase Tax=GWA2_Rokubacteria_70_23_curated
asparagine synthase
13_1_40cm_scaffold_2405_12
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13122..13703)
DNA (582bp) protein (194aa)
Uncharacterized protein n=2 Tax=Mycobacterium avium RepID=T2GV36_MYCAV
hypothetical protein Tax=RBG_16_Gamma2_60_9_curated
hypothetical protein
Displaying 12 items

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