name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_1_40cm_scaffold_2485_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
2..871
|
pyruvate ferredoxin oxidoreductase subunit beta; K00170 pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
pyruvate ferredoxin oxidoreductase subunit beta; K00170 pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1] id=24466814 bin=RBG_19FT_COMBO_GAL15_69_19 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
pyruvate ferredoxin oxidoreductase subunit beta (EC:1.2.7.1)
|
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13_1_40cm_scaffold_2485_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria
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Not on your lists |
961..1971
|
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative uncharacterized protein id=1837243 bin=GWD2_Deltaproteobacteria_55_8 species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
conserved exported hypothetical protein
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|
13_1_40cm_scaffold_2485_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria
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Not on your lists |
1972..2433
|
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein id=14626768 bin=bin7_NC10_sister species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
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|
13_1_40cm_scaffold_2485_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
2433..3953
|
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein id=14626767 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
|
|
13_1_40cm_scaffold_2485_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
3959..4654
|
Integral membrane protein TerC n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DC43_9BACT
integral membrane protein TerC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
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|
13_1_40cm_scaffold_2485_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
4701..5414
|
GntR family transcriptional regulator; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
transcriptional regulator id=14626765 bin=bin7_NC10_sister species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
GntR family transcriptional regulator
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13_1_40cm_scaffold_2485_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
5849..8560
|
ppdK; pyruvate phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
pyruvate phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1] id=14626757 bin=bin7_NC10_sister species=Methanohalophilus mahii genus=Methanohalophilus taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
ppdK; pyruvate phosphate dikinase (EC:2.7.9.1)
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13_1_40cm_scaffold_2485_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
8553..9440
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HOGA1, C10orf65; 4-hydroxy-2-oxoglutarate aldolase 1 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
HOGA1, C10orf65; 4-hydroxy-2-oxoglutarate aldolase 1 id=24519537 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Gallus gallus genus=Gallus taxon_order=Galliformes taxon_class=Aves phylum=Chordata tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
dihydrodipicolinate synthase/N-acetylneuraminate lyase
|
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13_1_40cm_scaffold_2485_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
9591..11141
|
ilvI; acetolactate synthase large subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ilvB; acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] id=14626755 bin=bin7_NC10_sister species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
ilvB; acetolactate synthase large subunit, biosynthetic type (EC:2.2.1.6)
|
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13_1_40cm_scaffold_2485_10
R_Rokubacteria_69_13, Rokubacteria, Bacteria
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Not on your lists |
11141..11719
|
ilvH; acetolactate synthase 3 regulatory subunit; K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Acetolactate synthase small subunit (Acetohydroxy-acid synthase small subunit) (AHAS) (ALS) id=3910683 bin=GWF2_Methylomirabilis_70_14 species=Methanomethylovorans hollandica genus=Methanomethylovorans taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acetolactate synthase
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13_1_40cm_scaffold_2485_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria
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Not on your lists |
11741..12745
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ilvC; Ketol-acid reductoisomerase (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) (EC:1.1.1.86) id=14626753 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ilvC; Ketol-acid reductoisomerase (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) (EC:1.1.1.86) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ilvC; Ketol-acid reductoisomerase (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) (EC:1.1.1.86)
|
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13_1_40cm_scaffold_2485_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
12748..13377
|
psd; phosphatidylserine decarboxylase (EC:4.1.1.65) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
psd; phosphatidylserine decarboxylase (EC:4.1.1.65) id=14626752 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
psd; phosphatidylserine decarboxylase (EC:4.1.1.65)
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13_1_40cm_scaffold_2485_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
13418..14215
|
CDP-diacylglycerol--serine O-phosphatidyltransferase; K00998 phosphatidylserine synthase [EC:2.7.8.8] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
CDP-diacylglycerol/serine O-phosphatidyltransferase id=4827335 bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
CDP-diacylglycerol--serine O-phosphatidyltransferase
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13_1_40cm_scaffold_2485_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
14230..15771
|
leuA; 2-isopropylmalate synthase (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) (EC:2.3.3.13) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
2-isopropylmalate synthase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] id=14626750 bin=bin7_NC10_sister species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
leuA; 2-isopropylmalate synthase (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) (EC:2.3.3.13)
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13_1_40cm_scaffold_2485_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
15783..16883
|
leuB; 3-isopropylmalate dehydrogenase (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) (EC:1.1.1.85) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
leuB; 3-isopropylmalate dehydrogenase (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) (EC:1.1.1.85)
3-isopropylmalate dehydrogenase id=4703436 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
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13_1_40cm_scaffold_2485_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
16883..17890
|
asd; Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC:1.2.1.11) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
asd; Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase id=4827332 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
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13_1_40cm_scaffold_2485_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
17975..18220
|
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein id=4703405 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_scaffold_2485_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
18316..18972
|
truA; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
tRNA pseudouridine synthase A (EC:5.4.99.12)
Pseudouridylate synthase I id=4703404 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_scaffold_2485_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
19019..19789
|
formate dehydrogenase family accessory protein (FdhD) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative formate dehydrogenase family accessory protein (FdhD) id=4703403 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
formate dehydrogenase family accessory protein (FdhD)
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13_1_40cm_scaffold_2485_20
unknown
|
Not on your lists |
comp(19761..20192)
|
This feature has no annotations |
|
13_1_40cm_scaffold_2485_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
20227..20499
|
id=3227803 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=24540628 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
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13_1_40cm_scaffold_2485_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
20626..21204
|
formate dehydrogenase subunit alpha (EC:1.7.99.4); K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] id=24540627 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermodesulfobacterium geofontis genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
formate dehydrogenase subunit alpha (EC:1.7.99.4); K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=GWA2_Rokubacteria_73_35_curated
formate dehydrogenase
|
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13_1_40cm_scaffold_2485_23
CSP1_6_Rokubacteria, Rokubacteria, Bacteria
|
Not on your lists |
21253..23163
|
formate dehydrogenase major subunit; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] id=24540626 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
formate dehydrogenase major subunit; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=CSP1_6_Rokubacteria
formate dehydrogenase
|