ggKbase home page

13_1_40cm_scaffold_2565

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2565_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2..589
DNA (588bp) protein (196aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14628119 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_2565_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

741..2120
DNA (1380bp) protein (460aa)
fimbrial assembly family protein; K02461 general secretion pathway protein L Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Fimbrial assembly family protein id=4806970 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
fimbrial assembly family protein
13_1_40cm_scaffold_2565_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2117..2686
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=14628104 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_2565_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2686..3411
DNA (726bp) protein (242aa)
uncharacterized LOC100208015 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4806968 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_2565_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3395..5803
DNA (2409bp) protein (803aa)
general secretion pathway protein D; K02453 general secretion pathway protein D Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
General secretion pathway protein D id=4806967 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
general secretion pathway protein D
13_1_40cm_scaffold_2565_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5800..6585)
DNA (786bp) protein (262aa)
enoyl-CoA hydratase; K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Enoyl-CoA hydratase/isomerase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CN47_DESK7
enoyl-CoA hydratase
13_1_40cm_scaffold_2565_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6735..7514
DNA (780bp) protein (260aa)
photosystem I assembly BtpA; K06971 Tax=GWA2_Rokubacteria_73_35_curated
Photosystem I assembly BtpA id=4048103 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
btpA; photosystem I assembly BtpA
13_1_40cm_scaffold_2565_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

7507..8409
DNA (903bp) protein (301aa)
glycosyl hydrolase; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
glycoside hydrolase family 3 domain-containing protein; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] id=14627915 bin=bin7_NC10_sister species=Chlorobaculum parvum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin7_NC10_sister organism_group=NC10
glycoside hydrolase family 3
Displaying 8 items

View Taxonomy