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13_1_40cm_scaffold_261

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_261_1
unknown

Not on your lists

1..87
DNA (87bp) protein (29aa)

This feature has no annotations

13_1_40cm_scaffold_261_2
Geitlerinema sp. PCC 7407, Geitlerinema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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182..586
DNA (405bp) protein (135aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9SA06_9CYAN
multi-sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:AFY67457.1}; TaxID=1173025 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Geitlerinema.;" source="Geitlerinema sp. PCC
13_1_40cm_scaffold_261_3
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

592..1053
DNA (462bp) protein (154aa)
Response regulator n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PFB4_9DELT
Response regulator {ECO:0000313|EMBL:EPX61741.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystoba
response regulator
13_1_40cm_scaffold_261_4
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1540..1953)
DNA (414bp) protein (138aa)
hypothetical protein n=2 Tax=Chlorogloeopsis RepID=UPI0002E46191
Integral membrane sensor hybrid histidine kinase {ECO:0000313|EMBL:EGK83486.1}; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleu
multi-sensor hybrid histidine kinase
13_1_40cm_scaffold_261_5
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2155..2499)
DNA (345bp) protein (115aa)
Response regulator n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MWY3_CORCM
Signal transduction response regulator {ECO:0000313|EMBL:AKF10195.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;"
divK; response regulator
13_1_40cm_scaffold_261_6
unknown

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2795..3172
DNA (378bp) protein (126aa)

This feature has no annotations

13_1_40cm_scaffold_261_7
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

3377..3886
DNA (510bp) protein (170aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GI00_9FIRM
DNA-binding response regulator Tax=RBG_16_Nitrospirae_64_22_curated
PhoP family transcriptional regulator
13_1_40cm_scaffold_261_8
GWE2_Gallionellales_58_10_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4113..4640
DNA (528bp) protein (176aa)
Putative transcriptional regulator, Crp/Fnr family id=2006129 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
Crp family transcriptional regulator Tax=GWE2_Gallionellales_58_10_curated
Crp family transcriptional regulator
13_1_40cm_scaffold_261_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4678..5742
DNA (1065bp) protein (355aa)
LysM domain-containing protein 2; K08086 pilus assembly protein FimV Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
WGS project CABT00000000 data, contig 2.14 id=3824668 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_261_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6247..7104
DNA (858bp) protein (286aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative uncharacterized protein id=3938568 bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_261_11
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7393..7833
DNA (441bp) protein (147aa)
transposase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CD5B7
Transposase {ECO:0000313|EMBL:KEO91084.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;"
transposase
13_1_40cm_scaffold_261_12
unknown

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8256..9020
DNA (765bp) protein (255aa)

This feature has no annotations

13_1_40cm_scaffold_261_13
unknown

Not on your lists

comp(9171..9386)
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_40cm_scaffold_261_14
unknown

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comp(9416..9622)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_scaffold_261_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9707..9991)
DNA (285bp) protein (95aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_scaffold_261_16
unknown

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10343..10561
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_scaffold_261_17
unknown

Not on your lists

10722..11000
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_40cm_scaffold_261_18
unknown

Not on your lists

11154..11357
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_scaffold_261_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11402..12601
DNA (1200bp) protein (400aa)
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases n=1 Tax=uncultured actinobacterium HF0770_13M05 RepID=E7C747_9ACTN
luciferase family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
luciferase family protein
13_1_40cm_scaffold_261_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12603..13385
DNA (783bp) protein (261aa)
Hydrolase (HAD superfamily) n=1 Tax=Rhodococcus sp. EsD8 RepID=N1M6I7_9NOCA
alpha/beta hydrolase fold protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
alpha/beta hydrolase
13_1_40cm_scaffold_261_21
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

13382..14071
DNA (690bp) protein (230aa)
fabG3; 3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100) Tax=GWC2_Rokubacteria_70_16_curated
3-oxoacyl-(Acyl-carrier-protein) reductase id=3222451 bin=GWC2_Methylomirabilis_70_16 species=Coprothermobacter proteolyticus genus=Coprothermobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase
13_1_40cm_scaffold_261_22
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14407..15126
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003750DFF
Uncharacterized protein {ECO:0000313|EMBL:ETW98117.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
13_1_40cm_scaffold_261_23
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

15275..15436
DNA (162bp) protein (54aa)
fused DNA topoisomerase I/SWI domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
fused DNA topoisomerase I/SWI domain-containing protein id=14429651 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin3_NC10 organism_group=NC10
fused DNA topoisomerase I/SWI domain-containing protein
13_1_40cm_scaffold_261_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(15509..15751)
DNA (243bp) protein (81aa)
haloacid dehalogenase (EC:3.8.1.2); K01560 2-haloacid dehalogenase [EC:3.8.1.2] Tax=GWA2_Rokubacteria_70_23_curated
haloacid dehalogenase (EC:3.8.1.2)
Haloacid dehalogenase, type II id=4863507 bin=GWA2_Methylomirabilis_73_35 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_261_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(16100..16990)
DNA (891bp) protein (297aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4) Tax=GWA2_Rokubacteria_70_23_curated
putative D-alanyl-D-alanine carboxypeptidase id=3249152 bin=GWC2_Methylomirabilis_70_24 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
D-alanyl-D-alanine carboxypeptidase
13_1_40cm_scaffold_261_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(17017..17286)
DNA (270bp) protein (90aa)
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Histone family protein DNA-binding protein id=4863501 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
histone family protein DNA-binding protein
13_1_40cm_scaffold_261_27
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(17287..17778)
DNA (492bp) protein (164aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=4863498 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_261_28
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(17775..18134)
DNA (360bp) protein (120aa)
hypothetical protein id=4863495 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_scaffold_261_29
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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18218..18778
DNA (561bp) protein (187aa)
Putative phosphohistidine phosphatase, SixA n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UNV3_METS4
putative phosphohistidine phosphatase SixA
Putative phosphohistidine phosphatase, SixA {ECO:0000313|EMBL:ACA17561.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Met
13_1_40cm_scaffold_261_30
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(18820..19899)
DNA (1080bp) protein (360aa)
Response regulator n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DC19_MYXXD
response regulator
Response regulator {ECO:0000313|EMBL:ABF87711.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus x
Displaying items 1-30 of 62 in total

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