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13_1_40cm_scaffold_2700

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2700_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1..816
DNA (816bp) protein (272aa)
dehydrogenase, E1 component; K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] Tax=GWA2_Rokubacteria_70_23_curated
Acetoin dehydrogenase (TPP-dependent) beta chain id=2985634 bin=GWF2_Methylomirabilis_70_14 species=Mesorhizobium metallidurans genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit
13_1_40cm_scaffold_2700_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

929..1771
DNA (843bp) protein (281aa)
iron permease FTR1; K07243 high-affinity iron transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
iron permease FTR1; K07243 high-affinity iron transporter id=14630789 bin=bin9_gal15 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
efeU; iron permease FTR1
13_1_40cm_scaffold_2700_3
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1771..1941
DNA (171bp) protein (57aa)
Uncharacterized protein {ECO:0000313|EMBL:ABS61809.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivor
13_1_40cm_scaffold_2700_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2014..2793
DNA (780bp) protein (260aa)
hypothetical protein id=4994652 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_scaffold_2700_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2820..4217)
DNA (1398bp) protein (466aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3) Tax=GWC2_Rokubacteria_70_16_curated
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Long-chain-fatty-acid--CoA ligase id=4766429 bin=GWC2_Methylomirabilis_70_16 species=Modestobacter marinus genus=Modestobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_2700_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4222..5577)
DNA (1356bp) protein (452aa)
UbiD family decarboxylase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
UbiD decarboxylase family protein id=3021522 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
UbiD family decarboxylase
13_1_40cm_scaffold_2700_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5635..6099)
DNA (465bp) protein (155aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=3430999 bin=GWA2_Methylomirabilis_73_35 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_2700_8
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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7366..7734
DNA (369bp) protein (123aa)
2,3-dihydroxybenzoate-amp ligase (EC:2.7.7.58); K02363 2,3-dihydroxybenzoate-AMP ligase [EC:2.7.7.58] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YUE7_9BACT
AMP-dependent synthetase and ligase
13_1_40cm_scaffold_2700_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7731..7985
DNA (255bp) protein (85aa)
phenylacetic acid degradation protein paaA id=14627178 bin=bin7_NC10_sister species=Frankia alni genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
phenylacetic acid degradation protein paaA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_1_40cm_scaffold_2700_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7982..8809
DNA (828bp) protein (276aa)
phenylacetic acid degradation protein paaA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
phenylacetic acid degradation protein paaA id=14627178 bin=bin7_NC10_sister species=Frankia alni genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
phenylacetic acid degradation protein paaA
13_1_40cm_scaffold_2700_11
unknown

Not on your lists

8844..9014
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_40cm_scaffold_2700_12
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9019..10023
DNA (1005bp) protein (335aa)
2OG-Fe(II) oxygenase n=1 Tax=Marinobacter sp. BSs20148 RepID=M1F9U2_9ALTE
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:ETW97855.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
2OG-Fe(II) oxygenase
13_1_40cm_scaffold_2700_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10052..10567)
DNA (516bp) protein (172aa)
Putative sensor histidine kinase id=4194125 bin=GWC2_Methylomirabilis_70_24 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative sensor histidine kinase Tax=GWA2_Rokubacteria_70_23_curated
Crp/Fnr family transcriptional regulator
13_1_40cm_scaffold_2700_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10583..11590)
DNA (1008bp) protein (336aa)
putative TIM-barrel fold metal-dependent hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase id=4770810 bin=GWA2_Methylomirabilis_73_35 species=Mycobacterium xenopi genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative TIM-barrel fold metal-dependent hydrolase
13_1_40cm_scaffold_2700_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(11645..13357)
DNA (1713bp) protein (571aa)
hypothetical protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] id=14626323 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=CSP1_6_Rokubacteria
acetolactate synthase catalytic subunit (EC:2.2.1.6)
13_1_40cm_scaffold_2700_16
unknown

Not on your lists

13672..14595
DNA (924bp) protein (308aa)

This feature has no annotations

13_1_40cm_scaffold_2700_17
unknown

Not on your lists

14912..15100
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_scaffold_2700_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15108..15404)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B588D1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX34606.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
Displaying 18 items

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