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13_1_40cm_scaffold_273

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_273_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3..710)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-A16 RepID=UPI0003612CC3
putative dioxygenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_scaffold_273_2
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(772..1089)
DNA (318bp) protein (106aa)
dioxygenase, ferredoxin subunit Tax=RBG_13_Deltaproteobacteria_65_10_curated
Dioxygenase, ferredoxin subunit id=4745862 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Rieske (2Fe-2S) domain-containing protein
13_1_40cm_scaffold_273_3
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(1098..2318)
DNA (1221bp) protein (407aa)
Leu/ile/val-binding protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YK45_THEYD
leu/ile/val-binding protein
Leu/ile/val-binding protein {ECO:0000313|EMBL:ACI21571.1}; TaxID=289376 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (
13_1_40cm_scaffold_273_4
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2341..3210)
DNA (870bp) protein (290aa)
Inner-membrane translocator n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UBX5_METS4
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ACA19935.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobac
13_1_40cm_scaffold_273_5
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3212..3937)
DNA (726bp) protein (242aa)
ABC transporter related n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UBX2_METS4
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ACA19932.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
13_1_40cm_scaffold_273_6
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(3934..4689)
DNA (756bp) protein (252aa)
Monosaccharide-transporting ATPase (EC:3.6.3.17); K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_13_Chloroflexi_50_10_curated
ABC transporter n=1 Tax=Martelella mediterranea RepID=UPI000369AA2F
ABC transporter-like protein
13_1_40cm_scaffold_273_7
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4686..5663)
DNA (978bp) protein (326aa)
High-affinity branched-chain amino acid transport system permease protein livm n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YK43_THEYD
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP69223.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
high-affinity branched-chain amino acid transport system permease LivM
13_1_40cm_scaffold_273_8
marine actinobacterium MedAcidi-G2A, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5668..6357)
DNA (690bp) protein (230aa)
Uncharacterized protein {ECO:0000313|EMBL:KIE52438.1}; TaxID=1550400 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2A.;"
13_1_40cm_scaffold_273_9
unknown

Not on your lists

comp(6371..6703)
DNA (333bp) protein (111aa)

This feature has no annotations

13_1_40cm_scaffold_273_10
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6700..7521)
DNA (822bp) protein (274aa)
Extradiol ring-cleavage dioxygenase class III protein subunit B
Extradiol ring-cleavage dioxygenase class III protein subunit B {ECO:0000313|EMBL:AIF53336.1}; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;"
13_1_40cm_scaffold_273_11
Chlamydia muridarum, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(7543..8400)
DNA (858bp) protein (286aa)
PqqC-like protein n=2 Tax=Chlamydia muridarum RepID=PQQCL_CHLMU
dehydrogenase
Dehydrogenase {ECO:0000313|EMBL:AIT91132.1}; TaxID=83560 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia muridarum.;"
13_1_40cm_scaffold_273_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8507..9442
DNA (936bp) protein (312aa)
formamidase (EC:3.5.1.49) Tax=GWC2_Rokubacteria_70_16_curated
Formamidase (EC:3.5.1.49)
Formamidase id=4766431 bin=GWC2_Methylomirabilis_70_16 species=Bacillus selenitireducens genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_273_13
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9439..10221
DNA (783bp) protein (261aa)
Ring-cleaving dioxygenase n=1 Tax=Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM 5965 / LMG 11199 / NCIMB 11358 / Stanier 221) RepID=F8H6E0_PSEUT
Strain NCTC 7096 contig_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIV58761.1}; TaxID=47500 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneur
ring-cleaving dioxygenase
13_1_40cm_scaffold_273_14
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10218..11243
DNA (1026bp) protein (342aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CNN9_9BRAD
Esterase {ECO:0000313|EMBL:KJC59100.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
13_1_40cm_scaffold_273_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11267..12097
DNA (831bp) protein (277aa)
oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative N5,N10-methylenetetrahydromethanopterin reductase-related protein id=4935480 bin=GWC2_Methylomirabilis_70_24 species=marine gamma proteobacterium HTCC2143 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
oxidoreductase
13_1_40cm_scaffold_273_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12097..12531
DNA (435bp) protein (145aa)
ppox class F420-dependent protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding id=4828262 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_273_17
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12708..13586
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V0T4_HALMA
Uncharacterized protein {ECO:0000313|EMBL:ETX03393.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
13_1_40cm_scaffold_273_18
unknown

Not on your lists

13647..13781
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_40cm_scaffold_273_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(14084..14782)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IPJ9_9BRAD
bluB; cob(II)yrinic acid a,c-diamide reductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
nitroreductase
13_1_40cm_scaffold_273_20
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14815..15909)
DNA (1095bp) protein (365aa)
hypothetical protein; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJR7_9SPHN
hypothetical protein
13_1_40cm_scaffold_273_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

15942..16436
DNA (495bp) protein (165aa)
MOSC domain containing protein id=3776762 bin=GWA2_Methylomirabilis_73_35 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_273_22
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

16526..17209
DNA (684bp) protein (228aa)
TENA/THI-4 family protein n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1Y0Z8_ANEAE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein
13_1_40cm_scaffold_273_23
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

17235..17543
DNA (309bp) protein (103aa)
Assimilatory nitrite reductase (NAD(P)H) small subunit {ECO:0000313|EMBL:ABQ91575.1}; EC=1.7.1.4 {ECO:0000313|EMBL:ABQ91575.1};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexal
Assimilatory nitrite reductase (NAD(P)H) small subunit n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UY72_ROSS1
Rieske (2Fe-2S) domain-containing protein
13_1_40cm_scaffold_273_24
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

17534..17956
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QT42_METTR
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein
13_1_40cm_scaffold_273_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17963..18118
DNA (156bp) protein (52aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_scaffold_273_26
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

18115..18876
DNA (762bp) protein (254aa)
coA-transferase III family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
L-carnitine dehydratase/bile acid-inducible protein F id=4426882 bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acyl-CoA transferase
Displaying 26 items

View Taxonomy