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13_1_40cm_scaffold_3179

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3179_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3..1001)
DNA (999bp) protein (333aa)
major facilitator superfamily MFS 1 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Fosmidomycin resistance protein id=4947488 bin=GWA2_Methylomirabilis_73_35 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major Facilitator Superfamily protein
13_1_40cm_scaffold_3179_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

1100..1582
DNA (483bp) protein (161aa)
Transcriptional regulator, MarR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZD5_9CHLR
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EFH81925.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Kted
13_1_40cm_scaffold_3179_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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1579..2166
DNA (588bp) protein (196aa)
OmpA/MotB domain protein id=14626729 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
OmpA/MotB domain protein Tax=CSP1_6_Rokubacteria
peptidoglycan-associated lipoprotein
13_1_40cm_scaffold_3179_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2240..2866
DNA (627bp) protein (209aa)
cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
ATP:cob(I)alamin adenosyltransferase id=4947487 bin=GWA2_Methylomirabilis_73_35 species=SAR324 cluster bacterium JCVI-SC AAA005 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_3179_5
unknown

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comp(2863..3132)
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_40cm_scaffold_3179_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(3149..3412)
DNA (264bp) protein (88aa)
Gas vesicle structural protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GVPA_KORVE
gas vesicle protein GVPa Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Gas vesicle structural protein
13_1_40cm_scaffold_3179_7
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3489..4745)
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI00036B715E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC82710.1}; Flags: Precursor;; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; An
13_1_40cm_scaffold_3179_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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5124..5600
DNA (477bp) protein (159aa)
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein Tax=GWC2_Rokubacteria_70_16_curated
(2Fe-2S)-binding domain protein id=3729521 bin=GWF2_Methylomirabilis_70_14 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
13_1_40cm_scaffold_3179_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5540..7669)
DNA (2130bp) protein (710aa)
id=1863425 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
13_1_40cm_scaffold_3179_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8216..9229
DNA (1014bp) protein (338aa)
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein id=14627887 bin=bin7_NC10_sister species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
13_1_40cm_scaffold_3179_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9226..9774
DNA (549bp) protein (183aa)
XRE family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cupin id=14627886 bin=bin7_NC10_sister species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
XRE family transcriptional regulator
13_1_40cm_scaffold_3179_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

9786..11447
DNA (1662bp) protein (554aa)
benzoyl-CoA-dihydrodiol lyase (EC:4.2.1.17); K15513 benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44] id=14627885 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
benzoyl-CoA-dihydrodiol lyase (EC:4.2.1.17); K15513 benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44] Tax=CSP1_6_Rokubacteria
benzoyl-CoA-dihydrodiol lyase (EC:4.2.1.17)
13_1_40cm_scaffold_3179_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

11447..11701
DNA (255bp) protein (85aa)
yfcX; isomerases acting on hydroxy acids and derivatives (EC:5.1.2.-); K15512 benzoyl-CoA 2,3-dioxygenase component B [EC:1.14.12.21] id=14627884 bin=bin7_NC10_sister species=Amphimedon queenslandica genus=Amphimedon taxon_order=Haplosclerida taxon_class=Demospongiae phylum=Porifera tax=bin7_NC10_sister organism_group=NC10
benzoyl-CoA oxygenase subunit B Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
Displaying 13 items

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