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13_1_40cm_scaffold_338

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_338_1
Streptomyces natalensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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213..1160
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0H434_STRA9
Methyltransferase {ECO:0000313|EMBL:KIZ17169.1}; TaxID=1240678 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensis ATCC 27448.;"
hypothetical protein
13_1_40cm_scaffold_338_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1181..1837)
DNA (657bp) protein (219aa)
rhomboid family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Rhomboid family protein id=4710831 bin=GWC2_Methylomirabilis_70_16 species=uncultured marine microorganism HF4000_APKG10H12 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rhomboid family protein
13_1_40cm_scaffold_338_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2282..4732
DNA (2451bp) protein (817aa)
K(+)-insensitive pyrophosphate-energized proton pump id=3585892 bin=GWF2_Methylomirabilis_70_14 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
potassium transporter Tax=GWA2_Rokubacteria_70_23_curated
potassium transporter
13_1_40cm_scaffold_338_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4740..5366
DNA (627bp) protein (209aa)
Protein dedA (Protein DSG-1) id=3212379 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dedA; protein dedA (Protein DSG-1) Tax=GWA2_Rokubacteria_70_23_curated
dedA; protein dedA (Protein DSG-1)
13_1_40cm_scaffold_338_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5363..6220
DNA (858bp) protein (286aa)
lipid A biosynthesis lauroyl acyltransferase (EC:2.3.1.-)
Lipid A biosynthesis acyltransferase id=3122081 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Lipid A biosynthesis acyltransferase Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_scaffold_338_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6217..6888
DNA (672bp) protein (224aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=5027499 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_338_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(6901..7326)
DNA (426bp) protein (142aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14627385 bin=bin7_NC10_sister species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_338_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7551..8864
DNA (1314bp) protein (438aa)
soluble lytic murein transglycosylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Soluble lytic murein transglycosylase id=5027497 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
lytic transglycosylase, SLT, LysM and LysM domain-containing
13_1_40cm_scaffold_338_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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8861..9106
DNA (246bp) protein (82aa)
sulfur carrier protein ThiS id=14627382 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
sulfur carrier protein ThiS Tax=CSP1_6_Rokubacteria
sulfur carrier protein ThiS
13_1_40cm_scaffold_338_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(9049..9966)
DNA (918bp) protein (306aa)
ribonuclease BN; K07058 membrane protein Tax=GWA2_Rokubacteria_73_35_curated
Ribonuclease BN id=5027495 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ribonuclease BN family protein
13_1_40cm_scaffold_338_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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10104..10562
DNA (459bp) protein (153aa)
hypothetical protein id=14627381 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_scaffold_338_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10504..11025
DNA (522bp) protein (174aa)
id=2650396 Tax=GWA2_Rokubacteria_73_35_curated
id=2650396 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_338_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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11022..11312
DNA (291bp) protein (97aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=3372626 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_338_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11302..12708
DNA (1407bp) protein (469aa)
L-seryl-tRNA(Sec) selenium transferase (EC:2.9.1.1); K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
L-seryl-tRNA(Sec) selenium transferase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase id=3372624 bin=GWA2_Methylomirabilis_73_35 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_338_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12839..14779
DNA (1941bp) protein (647aa)
selenocysteine-specific translation elongation factor (EC:2.7.7.4); K03833 selenocysteine-specific elongation factor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
selenocysteine-specific translation elongation factor (EC:2.7.7.4); K03833 selenocysteine-specific elongation factor id=14627377 bin=bin7_NC10_sister species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin7_NC10_sister organism_group=NC10
selenocysteine-specific translation elongation factor (EC:2.7.7.4)
13_1_40cm_scaffold_338_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14818..15000
DNA (183bp) protein (61aa)
hypothetical protein; K03116 sec-independent protein translocase protein TatA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Sec-independent protein translocase protein TatA id=3372620 bin=GWA2_Methylomirabilis_73_35 species=Chlorobaculum parvum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_338_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

15016..16650
DNA (1635bp) protein (545aa)
Putative uncharacterized protein id=3372618 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_338_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16628..18100
DNA (1473bp) protein (491aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Hypothetical membrane protein id=3372616 bin=GWA2_Methylomirabilis_73_35 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_338_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

18197..18805
DNA (609bp) protein (203aa)
Uncharacterized protein id=3372452 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Uncharacterized protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_scaffold_338_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18829..21651
DNA (2823bp) protein (941aa)
ileS; isoleucine tRNA synthetase (EC:6.1.1.5) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ileS; isoleucine tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase id=4006793 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_338_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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21648..22133
DNA (486bp) protein (162aa)
lspA; lipoprotein signal peptidase (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
lspA; lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase id=2650579 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_338_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

22130..23059
DNA (930bp) protein (310aa)
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
pseudouridine synthase id=4608907 bin=GWC2_Methylomirabilis_70_24 species=Sporolactobacillus inulinus genus=Sporolactobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
pseudouridine synthase
13_1_40cm_scaffold_338_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

23142..24518
DNA (1377bp) protein (459aa)
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase id=4608909 bin=GWC2_Methylomirabilis_70_24 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase
13_1_40cm_scaffold_338_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

24521..26362
DNA (1842bp) protein (614aa)
glmS; L-glutamine:D-fructose-6-phosphate aminotransferase (EC:2.6.1.16) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
glmS; L-glutamine:D-fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] id=4783126 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_338_25
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

26467..26736
DNA (270bp) protein (90aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative uncharacterized protein id=4964309 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_338_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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26753..27700
DNA (948bp) protein (316aa)
uvrD; DNA helicase II (EC:3.6.1.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
uvrD; DNA helicase II (EC:3.6.1.-) id=14627418 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
uvrD; DNA helicase II (EC:3.6.1.-)
Displaying 26 items

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