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13_1_40cm_scaffold_3395

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3395_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3..863)
DNA (861bp) protein (287aa)
radical SAM domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Radical SAM domain protein id=2216072 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Acidiphilium taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_3395_2
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(860..1996)
DNA (1137bp) protein (379aa)
hopanoid biosynthesis associated glycosyl transferase protein HpnI; K00720 ceramide glucosyltransferase [EC:2.4.1.80] Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
glycosyl transferase family protein (EC:2.4.1.80)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-604-B04 RepID=UPI000372C693
13_1_40cm_scaffold_3395_3
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

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comp(1993..2946)
DNA (954bp) protein (318aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
Putative uncharacterized protein id=1843113 bin=GWA2_Elusimicrobia_66_18 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
13_1_40cm_scaffold_3395_4
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(2943..4103)
DNA (1161bp) protein (387aa)
Uncharacterized protein id=5014944 bin=GWA2_Elusimicrobia_66_18 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
membrane protein Tax=RBG_16_Elusimicrobia_66_12_curated
CDP-alcohol phosphatidyltransferase
13_1_40cm_scaffold_3395_5
unknown

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comp(4202..4432)
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_40cm_scaffold_3395_6
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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4602..5462
DNA (861bp) protein (287aa)
hypothetical protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Binding-protein-dependent transport systems inner membrane component id=2259310 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_3395_7
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5459..6313
DNA (855bp) protein (285aa)
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
Binding-protein-dependent transport systems inner membrane component id=2259312 bin=GWA2_Methylomirabilis_73_35 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Maltose/maltodextrin ABC transporter, permease protein MalG
13_1_40cm_scaffold_3395_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6324..7628
DNA (1305bp) protein (435aa)
Putative ABC-type sugar transport system,periplasmic-binding component n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJ66_9CHLR
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_scaffold_3395_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7711..8865
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036E33EE
Uncharacterized protein {ECO:0000313|EMBL:ETX07993.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
luciferase
13_1_40cm_scaffold_3395_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8868..9740
DNA (873bp) protein (291aa)
Putative Zinc-dependent hydroxylase id=4255908 bin=GWC2_Methylomirabilis_70_16 species=Pseudomonas entomophila genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
beta-lactamase-like protein Tax=GWC2_Rokubacteria_70_16_curated
beta-lactamase-like protein
13_1_40cm_scaffold_3395_11
Photobacterium sp. AK15, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9728..10105
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Photobacterium sp. AK15 RepID=L8JA07_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELR64257.1}; TaxID=1056511 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium sp. AK1
13_1_40cm_scaffold_3395_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10134..11048
DNA (915bp) protein (305aa)
Putative F420-dependent oxidoreductase, Rv1855c family protein id=2720979 bin=GWA2_Methylomirabilis_73_35 species=Mycobacterium phlei genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative F420-dependent oxidoreductase, Rv1855c family Tax=GWA2_Rokubacteria_73_35_curated
F420-dependent N5 N10-methylene tetrahydromethanopterin reductase
13_1_40cm_scaffold_3395_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11045..12673)
DNA (1629bp) protein (543aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein id=2355466 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_3395_14

Not on your lists

comp(12708..14267)
DNA (1560bp) protein (520aa)
Bacterial extracellular solute-binding proteins, family 5 Middle {ECO:0000313|EMBL:AIA17927.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
extracellular solute-binding protein
13_1_40cm_scaffold_3395_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14807..15538
DNA (732bp) protein (244aa)
dnaA; chromosomal replication initiator protein dnaA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dnaA; chromosomal replication initiator protein dnaA id=14625297 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
chromosomal replication initiator protein DnaA
Displaying 15 items

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