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13_1_40cm_scaffold_4045

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4045_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(1..426)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI00037731B2
FMN-dependent alpha-hydroxy acid dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
FMN-dependent alpha-hydroxy acid dehydrogenase
13_1_40cm_scaffold_4045_2
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(404..1900)
DNA (1497bp) protein (499aa)
Amidohydrolase 2 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS74_PARL1
amidohydrolase 2 Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
amidohydrolase 2
13_1_40cm_scaffold_4045_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2023..3060
DNA (1038bp) protein (346aa)
luciferase-like protein Tax=GWA2_Rokubacteria_70_23_curated
id=4304045 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
5,10-methylenetetrahydromethanopterin reductase
13_1_40cm_scaffold_4045_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3064..3930)
DNA (867bp) protein (289aa)
ABC-type transporter, permease component: PepT family id=3428781 bin=GWC2_Methylomirabilis_70_16 species=Alcanivorax dieselolei genus=Alcanivorax taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dppC; PepT family ABC transporter permease Tax=GWC2_Rokubacteria_70_16_curated
dppC; PepT family ABC transporter permease
13_1_40cm_scaffold_4045_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3899..4843)
DNA (945bp) protein (315aa)
ABC transporter permease id=3709817 bin=GWC2_Methylomirabilis_70_24 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
dppB3; PepT family ABC transporter permease Tax=GWA2_Rokubacteria_70_23_curated
dppB3; PepT family ABC transporter permease
13_1_40cm_scaffold_4045_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(4848..6479)
DNA (1632bp) protein (544aa)
Hemin-binding lipoprotein id=4813980 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dipeptide ABC transporter substrate-binding protein Tax=GWC2_Rokubacteria_70_16_curated
dipeptide ABC transporter substrate-binding protein
13_1_40cm_scaffold_4045_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6596..7069
DNA (474bp) protein (158aa)
Putative uncharacterized protein id=4827669 bin=GWA2_Methylomirabilis_73_35 species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_4045_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7063..8052)
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037D6503
ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
oligopeptide/dipeptide ABC transporter ATPase
13_1_40cm_scaffold_4045_9
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(8039..8941)
DNA (903bp) protein (301aa)
Oligopeptide ABC transporter ATP-binding protein id=4621968 bin=GWA2_Methylomirabilis_73_35 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oligopeptide ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein Tax=RBG_13_Chloroflexi_51_36_curated
oligopeptide ABC transporter ATP-binding protein
13_1_40cm_scaffold_4045_10
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9007..9822)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036B24DF
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
h16_A2951; ABC transporter permease
13_1_40cm_scaffold_4045_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9885..10805)
DNA (921bp) protein (307aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YAL1_9BRAD
appB; ABC-type transporter, permease component: PepT family protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
gsiC4; glutathione ABC transporter permease GsiC
13_1_40cm_scaffold_4045_12
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10809..12371)
DNA (1563bp) protein (521aa)
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
Extracellular solute-binding protein family 5 id=4279222 bin=GWF2_Methylomirabilis_70_14 species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 5 extracellular solute-binding protein
13_1_40cm_scaffold_4045_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12479..13723
DNA (1245bp) protein (415aa)
ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89G66_BRADU
ABC transporter substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ABC transporter substrate-binding protein
13_1_40cm_scaffold_4045_14
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13751..14911)
DNA (1161bp) protein (387aa)
Amidohydrolase family n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4W007_9CYAN
TIM-barrel fold metal-dependent hydrolase Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
TIM-barrel fold metal-dependent hydrolase
13_1_40cm_scaffold_4045_15
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14924..16018)
DNA (1095bp) protein (365aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Ralstonia sp. PBA RepID=I9W3B8_9RALS
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EIZ02937.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" sourc
mandelate racemase/muconate lactonizing protein
13_1_40cm_scaffold_4045_16
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

16459..17679
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U1ZDS7_9PSED
general secretory pathway protein E; K02454 general secretion pathway protein E Tax=RBG_13_Nitrospirae_39_12_curated
general secretion pathway protein E
13_1_40cm_scaffold_4045_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

17797..18582
DNA (786bp) protein (262aa)
Enoyl-CoA hydratase/isomerase; K01715 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] Tax=GWA2_Rokubacteria_70_23_curated
short chain enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase/isomerase id=4051053 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_4045_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(18610..19317)
DNA (708bp) protein (236aa)
Putative branched-chain amino acid ABC transporter, ATP-binding protein id=3198383 bin=GWF2_Methylomirabilis_70_14 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
branched-chain amino acid ABC transporter ATP-binding protein
13_1_40cm_scaffold_4045_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(19311..21182)
DNA (1872bp) protein (624aa)
Putative branched-chain amino acid transport system protein id=4360586 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein; K01995 branched-chain amino acid transport system ATP-binding protein; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_1_40cm_scaffold_4045_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(21182..22075)
DNA (894bp) protein (298aa)
Branched-chain amino acid ABC transporter, permease protein id=4360585 bin=GWC2_Methylomirabilis_70_24 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
branched-chain amino acid ABC transporter permease
13_1_40cm_scaffold_4045_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(22097..23323)
DNA (1227bp) protein (409aa)
Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative id=4360584 bin=GWC2_Methylomirabilis_70_24 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
branched-chain amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
putative branched-chain amino acid ABC transporter
13_1_40cm_scaffold_4045_22
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23366..24121)
DNA (756bp) protein (252aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:ETW95944.1}; EC=4.2.1.17 {ECO:0000313|EMBL:ETW95944.1};; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source=
echA5; enoyl-CoA hydratase (EC:4.2.1.17)
Putative enoyl-CoA hydratase/isomerase family protein n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5Z2G8_NOCFA
13_1_40cm_scaffold_4045_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24124..25110)
DNA (987bp) protein (329aa)
Acryloyl-coenzyme A reductase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MJE0_CORCM
qor4; acryloyl-coenzyme A reductase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
qor4; acryloyl-coenzyme A reductase
13_1_40cm_scaffold_4045_24
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25132..26190)
DNA (1059bp) protein (353aa)
Putative uncharacterized protein n=1 Tax=Streptomyces hygroscopicus RepID=Q27YR5_STRHY
Uncharacterized protein {ECO:0000313|EMBL:ETW93583.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
amidohydrolase 3
13_1_40cm_scaffold_4045_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

26830..27264
DNA (435bp) protein (145aa)
putative uncharacterized protein
proline-rich region Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Proline-rich region id=2884821 bin=GWC2_Methylomirabilis_70_24 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_scaffold_4045_26
RLO_PLX_64_10, Bacteria

Not on your lists

comp(27293..27499)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2KW85_9RHIZ
Thiol-disulfide oxidoreductase domain-containing protein
thiol-disulfide oxidoreductase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Displaying 26 items

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