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13_1_40cm_scaffold_467

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_467_1
unknown

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2..127
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_scaffold_467_2
unknown

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comp(498..695)
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_scaffold_467_3

Not on your lists

1046..2332
DNA (1287bp) protein (429aa)
phenylacetate--CoA ligase (EC:6.2.1.30)
Putative phenylacetate-CoA ligase n=1 Tax=uncultured bacterium 1116 RepID=B8R903_9BACT
Putative phenylacetate-CoA ligase {ECO:0000313|EMBL:ACF98159.1}; TaxID=548899 species="Bacteria; environmental samples.;" source="uncultured bacterium 1116.;"
13_1_40cm_scaffold_467_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2372..3616
DNA (1245bp) protein (415aa)
oxidoreductase (EC:1.-.-.-); K09461 anthraniloyl-CoA monooxygenase [EC:1.14.13.40] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
oxidoreductase (EC:1.-.-.-)
Probable oxidoreductase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G078_SORC5
13_1_40cm_scaffold_467_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3625..4539
DNA (915bp) protein (305aa)
oxidoreductase (EC:1.-.-.-); K09461 anthraniloyl-CoA monooxygenase [EC:1.14.13.40] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
oxidoreductase (EC:1.-.-.-)
Oxidoreductase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AAA3_9PROT
13_1_40cm_scaffold_467_6
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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4608..5522
DNA (915bp) protein (305aa)
Methyltransferase, FkbM family n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AMG6_FLELS
FkbM family methyltransferase
Methyltransferase, FkbM family {ECO:0000313|EMBL:AFM05151.1}; TaxID=880071 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Flexibacter.;" source="Flexibacter litoralis (stra
13_1_40cm_scaffold_467_7
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5437..6165)
DNA (729bp) protein (243aa)
4'-phosphopantetheinyl transferase n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2J5H4_PSEUL
4'-phosphopantetheinyl transferase
4'-phosphopantetheinyl transferase {ECO:0000313|EMBL:BAK77319.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Ps
13_1_40cm_scaffold_467_8
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(6186..9164)
DNA (2979bp) protein (993aa)
Amino acid adenylation domain protein n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UK78_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KIE10575.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
non-ribosomal peptide synthetase
13_1_40cm_scaffold_467_9
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(10143..11396)
DNA (1254bp) protein (418aa)
Biotin biosynthesis cytochrome P450 {ECO:0000313|EMBL:KJF20497.1}; EC=1.14.-.- {ECO:0000313|EMBL:KJF20497.1};; TaxID=103808 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococ
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000371D86D
cytochrome P450
13_1_40cm_scaffold_467_10
RLO_PLX_64_10, Bacteria

Not on your lists

comp(11402..13180)
DNA (1779bp) protein (593aa)
amino acid adenylation domain protein (EC:5.1.1.13) Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
amino acid adenylation domain-containing protein (EC:1.2.1.31 5.1.1.11)
NosC n=1 Tax=Nostoc sp. GSV224 RepID=Q9RAH2_9NOSO
13_1_40cm_scaffold_467_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(13349..14830)
DNA (1482bp) protein (494aa)
NADH:flavin oxidoreductase Tax=GWA2_Rokubacteria_73_35_curated
NADH:flavin oxidoreductase/NADH oxidase id=4048083 bin=GWA2_Methylomirabilis_73_35 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NADH:flavin oxidoreductase
13_1_40cm_scaffold_467_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14827..16470)
DNA (1644bp) protein (548aa)
AMP-dependent synthetase and ligase Tax=GWA2_Rokubacteria_73_35_curated
NADH:flavin oxidoreductase/NADH oxidase id=4048083 bin=GWA2_Methylomirabilis_73_35 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
AMP-dependent synthetase and ligase
13_1_40cm_scaffold_467_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(16467..16880)
DNA (414bp) protein (138aa)
Endoribonuclease L-PSP id=4048084 bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative endoribonuclease, translation initiation inhibitor (modular protein) Tax=GWA2_Rokubacteria_73_35_curated
endoribonuclease L-PSP
13_1_40cm_scaffold_467_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(16877..17656)
DNA (780bp) protein (260aa)
short-chain dehydrogenases/reductases (sdr) family protein (EC:1.-.-.-)
Putative 3-oxoacyl-[acyl-carrier-protein] reductase id=4048086 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3-oxoacyl-[acyl-carrier-protein] reductase Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_scaffold_467_15
unknown

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comp(17653..17823)
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_40cm_scaffold_467_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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17864..19129
DNA (1266bp) protein (422aa)
4-hydroxybutyrate CoA-transferase Tax=GWA2_Rokubacteria_73_35_curated
Acetyl-CoA hydrolase/transferase id=4895019 bin=GWC2_Methylomirabilis_70_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acetyl-CoA hydrolase/transferase
13_1_40cm_scaffold_467_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(19119..19289)
DNA (171bp) protein (57aa)
id=4895018 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4895018 Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_scaffold_467_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

19433..20317
DNA (885bp) protein (295aa)
rih; inosine-uridine preferring nucleoside hydrolase (EC:3.2.2.1)
inosine-uridine preferring nucleoside hydrolase Tax=GWA2_Rokubacteria_73_35_curated
Inosine-uridine preferring nucleoside hydrolase id=3968020 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_scaffold_467_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

20314..21231
DNA (918bp) protein (306aa)
rbsK; ribokinase (EC:2.7.1.15); K00852 ribokinase [EC:2.7.1.15] Tax=GWA2_Rokubacteria_73_35_curated
rbsK; ribokinase (EC:2.7.1.15)
Ribokinase id=4048097 bin=GWA2_Methylomirabilis_73_35 species=Burkholderia multivorans genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_467_20
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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21288..22112
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI000346742C
polysaccharide deacetylase Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
polysaccharide deacetylase
13_1_40cm_scaffold_467_21
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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22109..22870
DNA (762bp) protein (254aa)
Short-chain family oxidoreductase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XGG9_9EURY
fabG; 3-ketoacyl-ACP reductase
Short-chain family oxidoreductase {ECO:0000313|EMBL:ELY60815.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotga
13_1_40cm_scaffold_467_22
Thermus oshimai, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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22885..24282
DNA (1398bp) protein (466aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Thermus oshimai JL-2 RepID=K7QVZ7_THEOS
ABC-type dipeptide transport system, periplasmic component
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:AFV75573.1}; Flags: Precursor;; TaxID=751945 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; The
13_1_40cm_scaffold_467_23
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24410..24835
DNA (426bp) protein (142aa)
diguanylate cyclase n=1 Tax=Laceyella sacchari RepID=UPI0003B582EC
Peptide transporter {ECO:0000313|EMBL:KKB86755.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
dppC-1; dipeptide ABC transporter permease protein DppC 1
13_1_40cm_scaffold_467_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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24838..26124
DNA (1287bp) protein (429aa)
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative sugar uptake ABC transporter periplasmic solute-binding protein id=2228895 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sugar ABC transporter substrate-binding protein
13_1_40cm_scaffold_467_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(26158..27111)
DNA (954bp) protein (318aa)
glycosyl hydrolase; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
glycoside hydrolase family 3 domain-containing protein; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] id=14627915 bin=bin7_NC10_sister species=Chlorobaculum parvum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin7_NC10_sister organism_group=NC10
glycoside hydrolase
Displaying 25 items

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