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13_1_40cm_scaffold_508

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_508_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(3..413)
DNA (411bp) protein (137aa)
h16_A2129; Zn-dependent hydrolase id=14625954 bin=bin7_NC10_sister species=Herbaspirillum sp. JC206 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
h16_A2129; Zn-dependent hydrolase Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_scaffold_508_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

760..1170
DNA (411bp) protein (137aa)
cobalbumin biosynthesis protein (EC:2.7.7.62); K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_cu
adenosylcobinamide-phosphate guanylyltransferase (EC:2.7.7.62)
adenosylcobinamide kinase id=2285111 bin=GWA2_Methylomirabilis_73_35 species=Citromicrobium bathyomarinum genus=Citromicrobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_508_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1151..2203
DNA (1053bp) protein (351aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21); K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] Tax=GWA2_Rokubacteria_
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase id=4820068 bin=GWC2_Methylomirabilis_70_16 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_508_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2204..3598
DNA (1395bp) protein (465aa)
cobB; cobyrinic acid a,c-diamide synthase; K02224 cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Cobyrinic acid A,C-diamide synthase n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q6A3_9DELT
cobyrinic acid A,C-diamide synthase
13_1_40cm_scaffold_508_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3592..4473
DNA (882bp) protein (294aa)
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Periplasmic binding protein id=2285114 bin=GWA2_Methylomirabilis_73_35 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
periplasmic binding protein
13_1_40cm_scaffold_508_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4470..5486
DNA (1017bp) protein (339aa)
btuC; vitamin B12 import system permease protein BtuC; K02015 iron complex transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
btuC; vitamin B12 import system permease protein BtuC; K02015 iron complex transport system permease protein id=14627281 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
btuC; vitamin B12 import system permease protein BtuC
13_1_40cm_scaffold_508_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

5483..6316
DNA (834bp) protein (278aa)
putative Vitamin B12 import system, ATP-binding protein BtuD (EC:3.6.3.-); K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] id=14627282 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
putative Vitamin B12 import system, ATP-binding protein BtuD (EC:3.6.3.-); K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] Tax=CSP1_6_Rokubacteria
iron ABC transporter ATP-binding protein
13_1_40cm_scaffold_508_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6545..8494
DNA (1950bp) protein (650aa)
Cobalamin uptake ligand-gated TonB-dependent outer membrane channel id=2810438 bin=GWF2_Methylomirabilis_70_14 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
btuB; TonB-dependent outer membrane receptor for cobalamin and Fe transport; K02014 iron complex outermembrane recepter protein Tax=GWA2_Rokubacteria_70_23_curated
btuB; cobalamin uptake ligand-gated TonB-dependent outer membrane channel
13_1_40cm_scaffold_508_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8505..9161
DNA (657bp) protein (219aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Uncharacterized conserved protein id=2285119 bin=GWA2_Methylomirabilis_73_35 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_508_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9707..10114
DNA (408bp) protein (136aa)
TonB family protein; K03832 periplasmic protein TonB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
TonB family protein id=2285121 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TonB family protein
13_1_40cm_scaffold_508_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10172..10687
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XV92_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37147.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
13_1_40cm_scaffold_508_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10684..12198
DNA (1515bp) protein (505aa)
cbiP; adenosylcobyric acid synthase (glutamine-hydrolyzing) (EC:6.3.5.10); K02232 adenosylcobyric acid synthase [EC:6.3.5.10] Tax=GWA2_Rokubacteria_73_35_curated
cbiP; adenosylcobyric acid synthase (EC:6.3.5.10)
Cobyric acid synthase id=2285123 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_508_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12267..13118
DNA (852bp) protein (284aa)
cobalamin biosynthesis protein CobD Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cobalamin biosynthesis protein CobD id=2285125 bin=GWA2_Methylomirabilis_73_35 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cbiB; cobalamin biosynthesis protein CbiB
13_1_40cm_scaffold_508_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13449..14234
DNA (786bp) protein (262aa)
Sporulation and cell division repeat protein id=2285129 bin=GWA2_Methylomirabilis_73_35 species=Xanthomonas fragariae genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_508_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

14218..14784
DNA (567bp) protein (189aa)
hprT; hypoxanthine-guanine phosphoribosyltransferase; K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hprT; hypoxanthine-guanine phosphoribosyltransferase; K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] id=14628007 bin=bin7_NC10_sister species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
HGPRTase: hypoxanthine phosphoribosyltransferase
13_1_40cm_scaffold_508_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14836..16230
DNA (1395bp) protein (465aa)
ftsH; cell division protein FtsH; ATP-dependent zinc-metallo protease (EC:3.4.24.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ftsH; cell division protein FtsH; ATP-dependent zinc-metallo protease (EC:3.4.24.-) id=14628006 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ftsH; cell division protein FtsH; ATP-dependent zinc-metallo protease (EC:3.4.24.-)
Displaying 16 items

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