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13_1_40cm_scaffold_5380

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_5380_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1..147
DNA (147bp) protein (49aa)
Inner-membrane translocator id=4565328 bin=GWC2_Methylomirabilis_70_24 species=Afipia sp. 1NLS2 genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Inner-membrane translocator Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_scaffold_5380_2
unknown

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144..299
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_40cm_scaffold_5380_3
unknown

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744..953
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_40cm_scaffold_5380_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1058..2026
DNA (969bp) protein (323aa)
amino acid ABC transporter; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Amino acid/amide ABC transporter membrane protein 2, HAAT family id=3859502 bin=GWF2_Methylomirabilis_70_14 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid ABC transporter
13_1_40cm_scaffold_5380_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2023..2766
DNA (744bp) protein (248aa)
ABC transporter ATP-binding/permease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter-like protein id=4565330 bin=GWC2_Methylomirabilis_70_24 species=Oxalobacteraceae bacterium IMCC9480 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter permease
13_1_40cm_scaffold_5380_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2729..3487
DNA (759bp) protein (253aa)
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC-type branched-chain amino acid transport system, ATPase component id=4565331 bin=GWC2_Methylomirabilis_70_24 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter-like protein
13_1_40cm_scaffold_5380_7
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

3487..5079
DNA (1593bp) protein (531aa)
FAD dependent oxidoreductase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BCF7_STRRD
FAD dependent oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
FAD dependent oxidoreductase
13_1_40cm_scaffold_5380_8
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5114..6310)
DNA (1197bp) protein (399aa)
pigment protein n=1 Tax=Afipia birgiae RepID=UPI0002FA19A6
pigment protein Tax=RBG_16_Betaproteobacteria_66_20_curated
putative pigment protein
13_1_40cm_scaffold_5380_9
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6307..6780)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI0003818873
hypothetical protein Tax=RBG_16_Betaproteobacteria_66_20_curated
dioxygenase
13_1_40cm_scaffold_5380_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6830..7033
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002D90C68
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_scaffold_5380_11
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7587..7844
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VTZ4_9BURK
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein
13_1_40cm_scaffold_5380_12
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7854..8543
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035CC41D
two component transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
two component transcriptional regulator
13_1_40cm_scaffold_5380_13
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8543..9808
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037D6E22
two component sensor histidine kinase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
two component sensor histidine kinase
13_1_40cm_scaffold_5380_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9821..10933)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QMG2_BORBO
LVIVD repeat-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_scaffold_5380_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

10981..11322
DNA (342bp) protein (114aa)
Putative uncharacterized protein id=4935528 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
Displaying 15 items

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