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13_1_40cm_scaffold_6007

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_6007_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1..204
DNA (204bp) protein (68aa)
id=14627426 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=3296245 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_scaffold_6007_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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201..1694
DNA (1494bp) protein (498aa)
acyltransferase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Phospholipid/glycerol acyltransferase id=4385646 bin=GWC2_Methylomirabilis_70_24 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_40cm_scaffold_6007_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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1691..2608
DNA (918bp) protein (306aa)
creatininase family protein; K01470 creatinine amidohydrolase [EC:3.5.2.10] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
creatininase family protein; K01470 creatinine amidohydrolase [EC:3.5.2.10] id=14627946 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
creatininase family protein
13_1_40cm_scaffold_6007_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2605..3351
DNA (747bp) protein (249aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55) Tax=GWA2_Rokubacteria_73_35_curated
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
3-hydroxybutyryl-CoA dehydratase id=3963825 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_6007_5
unknown

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comp(3359..3790)
DNA (432bp) protein (144aa)

This feature has no annotations

13_1_40cm_scaffold_6007_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3868..5922)
DNA (2055bp) protein (685aa)
Putative phytochrome sensor protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UA81_METS4
putative phytochrome sensor protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative phytochrome sensor protein
13_1_40cm_scaffold_6007_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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6110..7381
DNA (1272bp) protein (424aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
ABC-type branched-chain amino acid transport systems, periplasmic component id=4923977 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
twin-arginine translocation pathway signal protein
13_1_40cm_scaffold_6007_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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7419..8210
DNA (792bp) protein (264aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
Inner-membrane translocator id=4923979 bin=GWC2_Methylomirabilis_70_16 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
inner-membrane translocator
13_1_40cm_scaffold_6007_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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8207..9154
DNA (948bp) protein (316aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein id=14626692 bin=bin7_NC10_sister species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
inner-membrane translocator
13_1_40cm_scaffold_6007_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

9316..9759
DNA (444bp) protein (148aa)
ABC transporter related protein id=4923983 bin=GWC2_Methylomirabilis_70_16 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=GWC2_Rokubacteria_70_16_curated
ABC transporter
Displaying 10 items

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