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13_1_40cm_scaffold_6094

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_6094_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1..885
DNA (885bp) protein (295aa)
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding id=3010429 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein Tax=GWC2_Rokubacteria_70_16_curated
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
13_1_40cm_scaffold_6094_2
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

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976..1881
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00037F4586
sugar ABC transporter permease; K02025 multiple sugar transport system permease protein Tax=Caldatribacterium californiense
carbohydrate ABC transporter membrane protein 1
13_1_40cm_scaffold_6094_3

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1881..2762
DNA (882bp) protein (294aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TNU7_MESCW
Marine sediment metagenome DNA, contig: S01H4_C02701 {ECO:0000313|EMBL:GAG66460.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
binding-protein-dependent transport systems inner membrane component
13_1_40cm_scaffold_6094_4

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2784..4247
DNA (1464bp) protein (488aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI0003619F84
Marine sediment metagenome DNA, contig: S03H2_C01213 {ECO:0000313|EMBL:GAH30185.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
ABC transporter substrate-binding protein
13_1_40cm_scaffold_6094_5
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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4254..5087
DNA (834bp) protein (278aa)
PREDICTED: formamidopyrimidine-DNA glycosylase-like n=1 Tax=Amphimedon queenslandica RepID=UPI00021A600D
Uncharacterized protein {ECO:0000313|EMBL:ETX00967.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Formamidopyrimidine-DNA glycosylase
13_1_40cm_scaffold_6094_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5091..5450)
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CTW7_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS18317.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (
13_1_40cm_scaffold_6094_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5447..6016)
DNA (570bp) protein (190aa)
nitrile hydratase (EC:4.2.1.84); K01721 nitrile hydratase [EC:4.2.1.84] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
nitrile hydratase (EC:4.2.1.84)
Nitrile hydratase, beta subunit n=1 Tax=Klebsiella sp. 1_1_55 RepID=D6GDA6_9ENTR
13_1_40cm_scaffold_6094_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(6013..6657)
DNA (645bp) protein (215aa)
nitrile hydratase subunit alpha (EC:4.2.1.84); K01721 nitrile hydratase [EC:4.2.1.84] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cobalt-containing nitrile hydratase subunit alpha id=4793524 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Cobalt-containing nitrile hydratase subunit alpha
13_1_40cm_scaffold_6094_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(6654..7247)
DNA (594bp) protein (198aa)
Phosphonopyruvate decarboxylase (EC:4.1.1.82)
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein 11 id=4468121 bin=GWC2_Methylomirabilis_70_16 species=Achromobacter xylosoxidans genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
thiamine pyrophosphate enzyme, C-terminal TPP binding domain-containing protein 11 Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_scaffold_6094_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(7244..7780)
DNA (537bp) protein (179aa)
Sulfopyruvate decarboxylase - alpha subunit (EC:4.1.1.79)
thiamine pyrophosphate enzyme, N-terminal TPP-binding domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain-containing protein id=4468117 bin=GWC2_Methylomirabilis_70_16 species=Cupriavidus sp. HMR-1 genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_6094_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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7824..8126
DNA (303bp) protein (101aa)
peptidylprolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915, ECO:0000313|EMBL:CBE67374.1};; TaxID=671143 species="Bacteria; candidate division NC10;
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ09_9BACT
Displaying 11 items

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