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13_1_40cm_scaffold_6206

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_6206_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1..132
DNA (132bp) protein (44aa)
NUDIX hydrolase id=4464477 bin=GWA2_Methylomirabilis_73_35 species=Frankia sp. EUN1f genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NUDIX hydrolase Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_scaffold_6206_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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129..1622
DNA (1494bp) protein (498aa)
benzoate-CoA ligase family Tax=GWA2_Rokubacteria_70_23_curated
Benzoate-CoA ligase family id=4137710 bin=GWF2_Methylomirabilis_70_14 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
benzoate-CoA ligase family
13_1_40cm_scaffold_6206_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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1623..2063
DNA (441bp) protein (147aa)
putative 4-hydroxybenzoyl-CoA thioesterase; K01075 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
4-hydroxybenzoyl-CoA thioesterase id=4401184 bin=GWC2_Methylomirabilis_70_24 species=SAR324 cluster bacterium SCGC AAA001-C10 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
thioesterase superfamily protein
13_1_40cm_scaffold_6206_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2131..3345
DNA (1215bp) protein (405aa)
Extracellular ligand-binding receptor id=4401190 bin=GWC2_Methylomirabilis_70_24 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
extracellular ligand-binding receptor
13_1_40cm_scaffold_6206_5
R_NC10_66_22, NC10, Bacteria

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3440..4309
DNA (870bp) protein (290aa)
amino acid ABC transporter Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
ABC-type transporter, integral membrane subunit id=4137668 bin=GWF2_Methylomirabilis_70_14 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter
13_1_40cm_scaffold_6206_6
R_NC10_66_22, NC10, Bacteria

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4306..5229
DNA (924bp) protein (308aa)
ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Inner-membrane translocator id=2751017 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter permease
13_1_40cm_scaffold_6206_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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5226..5966
DNA (741bp) protein (247aa)
UPI000297112C related cluster id=2304939 bin=GWA2_Methylomirabilis_73_35 species=Thermus oshimai genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sugar ABC transporter ATPase Tax=GWA2_Rokubacteria_73_35_curated
branched-chain amino acid ABC transporter ATPase
13_1_40cm_scaffold_6206_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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5929..6705
DNA (777bp) protein (259aa)
putative ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ABC transporter id=3813269 bin=GWF2_Methylomirabilis_70_14 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter-like protein
13_1_40cm_scaffold_6206_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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6712..7566
DNA (855bp) protein (285aa)
metallo-beta-lactamase family-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Metallo-beta-lactamase superfamily protein id=4401260 bin=GWC2_Methylomirabilis_70_24 species=uncultured bacterium CSL144 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
blaB; metallo-beta-lactamase family protein
13_1_40cm_scaffold_6206_10
unknown

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9098..9340
DNA (243bp) protein (81aa)

This feature has no annotations

Displaying 10 items

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