ggKbase home page

13_1_40cm_scaffold_642

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_642_1
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..364
DNA (363bp) protein (121aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12GM4_POLSJ
inner-membrane translocator
Amino acid/amide ABC transporter membrane protein 2, HAAT family {ECO:0000313|EMBL:ABE42318.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Pol
13_1_40cm_scaffold_642_2
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

357..1136
DNA (780bp) protein (260aa)
ABC transporter related n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IAY5_METNO
LivG protein {ECO:0000313|EMBL:BAQ44816.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticu
ABC transporter-like protein
13_1_40cm_scaffold_642_3
Thermus oshimai, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

1180..1842
DNA (663bp) protein (221aa)
amino acid ABC transporter ATPase n=1 Tax=Thermus islandicus RepID=UPI0003B2F5A7
ABC-type branched-chain amino acid transport systems, ATPase component
ABC-type branched-chain amino acid transport systems, ATPase component {ECO:0000313|EMBL:AFV75574.1}; TaxID=751945 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;"
13_1_40cm_scaffold_642_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(2020..3369)
DNA (1350bp) protein (450aa)
Carboxylyase-related protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13QK3_BURXL
carboxylyase-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
carboxylyase-like protein
13_1_40cm_scaffold_642_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3375..4445)
DNA (1071bp) protein (357aa)
Tat (Twin-arginine translocation) pathway signal sequence domain protein n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JK97_SYNJB
hypothetical protein; K02051 NitT/TauT family transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Tat pathway signal sequence domain-containing protein
13_1_40cm_scaffold_642_6
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4474..5247)
DNA (774bp) protein (258aa)
ABC transporter permease n=1 Tax=Streptomyces niveus NCIMB 11891 RepID=V6KLR5_STRNV
ABC transporter permease protein
ABC transporter permease {ECO:0000313|EMBL:EST32371.1}; TaxID=1352941 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
13_1_40cm_scaffold_642_7
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(5244..6002)
DNA (759bp) protein (253aa)
ABC transporter related protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3W7_SPHTD
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACZ38934.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.
13_1_40cm_scaffold_642_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6011..6670)
DNA (660bp) protein (220aa)
Isochorismatase hydrolase (EC:3.3.2.1)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003797A37
isochorismatase hydrolase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
13_1_40cm_scaffold_642_9
unknown

Not on your lists

6718..7002
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_scaffold_642_10
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7178..8182
DNA (1005bp) protein (335aa)
Med/YjaW-like protein n=1 Tax=Enterobacter cloacae RepID=Q9ALV0_ENTCL
Med/YjaW-like protein {ECO:0000313|EMBL:AAK11689.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex
ABC transporter periplasmic protein
13_1_40cm_scaffold_642_11
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8221..9759
DNA (1539bp) protein (513aa)
Putative ABC-transporter ATP-binding protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ICF0_AZOC5
ABC transporter ATP-binding protein
Putative ABC-transporter ATP-binding protein {ECO:0000313|EMBL:BAF89198.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source=
13_1_40cm_scaffold_642_12
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9756..10814
DNA (1059bp) protein (353aa)
ABC transporter permease 1 n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ICF3_AZOC5
ABC transporter permease
ABC transporter permease 1 {ECO:0000313|EMBL:BAF89199.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caul
13_1_40cm_scaffold_642_13
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10811..11731
DNA (921bp) protein (307aa)
ABC transporter permease protein 2 n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ICF5_AZOC5
ABC transporter permease
ABC transporter permease protein 2 {ECO:0000313|EMBL:BAF89200.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizob
13_1_40cm_scaffold_642_14
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

11791..12882
DNA (1092bp) protein (364aa)
barbiturase (EC:3.5.2.1)
Barbiturase {ECO:0000313|EMBL:ABC20412.1}; EC=3.5.2.1 {ECO:0000313|EMBL:ABC20412.1};; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella
Barbiturase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RGM7_MOOTA
13_1_40cm_scaffold_642_15
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

12940..13332
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G2M6_9CYAN
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein
13_1_40cm_scaffold_642_16
unknown

Not on your lists

13329..13517
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_scaffold_642_17
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

13514..14374
DNA (861bp) protein (287aa)
Amidase {ECO:0000313|EMBL:CBN54627.1}; EC=3.5.1.4 {ECO:0000313|EMBL:CBN54627.1};; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillat
Amidase n=2 Tax=Oscillatoria RepID=D8FW87_9CYAN
amidohydrolase, AtzE family
Displaying 17 items

View Taxonomy