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13_1_40cm_scaffold_655

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_655_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1..162
DNA (162bp) protein (54aa)
Two-component hybrid sensor and regulator id=2811822 bin=GWC2_Methylomirabilis_70_24 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_scaffold_655_2
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

370..822
DNA (453bp) protein (151aa)
Response regulator n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PFB4_9DELT
Response regulator {ECO:0000313|EMBL:AKF80173.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus
response regulator
13_1_40cm_scaffold_655_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

940..3906
DNA (2967bp) protein (989aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Uncharacterized protein id=3875409 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_655_4
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3932..4375
DNA (444bp) protein (148aa)
Thioredoxin n=1 Tax=delta proteobacterium NaphS2 RepID=D8FEQ5_9DELT
Thioredoxin {ECO:0000313|EMBL:EFK05750.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
thioredoxin
13_1_40cm_scaffold_655_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4372..5154
DNA (783bp) protein (261aa)
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding id=5011110 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pyridoxamine 5'-phosphate oxidase-like protein; K07226 hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
pyridoxamine 5'-phosphate oxidase-like protein
13_1_40cm_scaffold_655_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5129..7519)
DNA (2391bp) protein (797aa)
coxL; carbon monoxide dehydrogenase (EC:1.2.99.2)
Carbon monoxide dehydrogenase large chain n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISQ8_RHOCS
coxL2; carbon-monoxide dehydrogenase large subunit Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
13_1_40cm_scaffold_655_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(7524..8477)
DNA (954bp) protein (318aa)
cupin; K00450 gentisate 1,2-dioxygenase [EC:1.13.11.4] id=14625736 bin=bin7_NC10_sister species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
cupin; K00450 gentisate 1,2-dioxygenase [EC:1.13.11.4] Tax=CSP1_6_Rokubacteria
Cupin 2 barrel domain-containing protein
13_1_40cm_scaffold_655_8
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8453..9364)
DNA (912bp) protein (304aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Fervidobacterium pennivorans (strain DSM 9078 / Ven5) RepID=H9U9W4_FERPD
monosaccharide ABC transporter substrate-binding protein, CUT2 family; K10439 ribose transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
monosaccharide ABC transporter substrate-binding protein, CUT2 family
13_1_40cm_scaffold_655_9
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9387..9503)
DNA (117bp) protein (39aa)
ribose ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
13_1_40cm_scaffold_655_10
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9518..10255)
DNA (738bp) protein (246aa)
araH; L-arabinose transporter permease protein (EC:3.6.3.17)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2N2C6_9ACTO
ribose ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
13_1_40cm_scaffold_655_11
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10283..11554)
DNA (1272bp) protein (424aa)
D-ribose transporter ATP binding protein n=1 Tax=Streptomyces chartreusis RepID=UPI000262D9B7
ABC transporter-like protein Tax=RBG_16_Betaproteobacteria_64_18_curated
sugar ABC transporter ATP-binding protein
13_1_40cm_scaffold_655_12
unknown

Not on your lists

11559..11807
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_scaffold_655_13
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11699..12763)
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI000368E4A4
2,5-dihydroxypyridine 5,6-dioxygenase {ECO:0000313|EMBL:KJK22775.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae
putative peptidase M29 family
13_1_40cm_scaffold_655_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12875..13189
DNA (315bp) protein (105aa)
Ethyl tert-butyl ether degradation EthD id=5011107 bin=GWA2_Methylomirabilis_73_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
ethyl tert-butyl ether degradation EthD
13_1_40cm_scaffold_655_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13191..14615
DNA (1425bp) protein (475aa)
Fumarate reductase/succinate dehydrogenase flavoprotein-like protein id=5011106 bin=GWA2_Methylomirabilis_73_35 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tricarballylate dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
tricarballylate dehydrogenase
13_1_40cm_scaffold_655_16
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14654..15214
DNA (561bp) protein (187aa)
Oxidoreductase, 2OG-Fe(II) oxygenase family n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FFS6_STIAD
2og-fe(II) oxygenase family oxidoreductase
Oxidoreductase, 2OG-Fe(II) oxygenase family {ECO:0000313|EMBL:ADO73999.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigma
13_1_40cm_scaffold_655_17
Methanococcus maripaludis, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(15215..15616)
DNA (402bp) protein (134aa)
Roadblock/LC7 family protein {ECO:0000313|EMBL:ABX01772.1}; TaxID=444158 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus maripa
13_1_40cm_scaffold_655_18
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15616..16404)
DNA (789bp) protein (263aa)
TPR repeat n=1 Tax=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) RepID=Q15YT9_PSEA6
sulfotransferase Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
hypothetical protein
13_1_40cm_scaffold_655_19
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

16713..17075
DNA (363bp) protein (121aa)
putative chemotaxis regulator CheY; K02658 twitching motility two-component system response regulator PilH Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative chemotaxis regulator CheY
Response regulator receiver protein id=1893308 bin=GWD2_Nitrospirae-related_57_8 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
13_1_40cm_scaffold_655_20
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17072..17545
DNA (474bp) protein (158aa)
Chemotaxis signal transduction protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67P73_SYMTH
cheW2; chemotaxis signal transduction protein
Chemotaxis signal transduction protein {ECO:0000313|EMBL:BAD40520.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacter
13_1_40cm_scaffold_655_21
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

18169..18768
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YJP1_THEYD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI21984.1}; TaxID=289376 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (stra
13_1_40cm_scaffold_655_22
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

18765..20561
DNA (1797bp) protein (599aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI000368576A
methyl-accepting chemotaxis sensory transducer; K02660 twitching motility protein PilJ Tax=GWC2_Nitrospirae_57_13_curated
methyl-accepting chemotaxis protein
13_1_40cm_scaffold_655_23
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20581..21399
DNA (819bp) protein (273aa)
CheR-type MCP methyltransferase (EC:2.1.1.80)
MCP methyltransferase, CheR-type {ECO:0000313|EMBL:ABK51997.1}; EC=2.1.1.80 {ECO:0000313|EMBL:ABK51997.1};; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermu
MCP methyltransferase, CheR-type n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRD7_ACIC1
13_1_40cm_scaffold_655_24
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

21441..24197
DNA (2757bp) protein (919aa)
CheA signal transduction histidine kinase n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BG21_MEISD
CheA signal transduction histidine kinase
CheA signal transduction histidine kinase {ECO:0000313|EMBL:ADH63724.1}; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silv
13_1_40cm_scaffold_655_25
Pyrococcus sp. NA2, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

24194..25285
DNA (1092bp) protein (364aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=342949 species="Archaea; Euryarchaeota; Thermoco
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HN45_PYRSN
chemotaxis-specific methylesterase
13_1_40cm_scaffold_655_26
unknown

Not on your lists

25275..25733
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_40cm_scaffold_655_27
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

25730..26116
DNA (387bp) protein (129aa)
Positive regulator of CheA protein activity (CheW) n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QCU5_9DELT
chemotaxis protein CheW; K03408 purine-binding chemotaxis protein CheW Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_scaffold_655_28
CSP1_5_NC10, NC10, Bacteria

Not on your lists

26094..26861
DNA (768bp) protein (256aa)
response regulator receiver protein id=14428717 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
response regulator receiver protein Tax=CSP1_5_NC10
response regulator receiver protein
13_1_40cm_scaffold_655_29
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

26874..27839
DNA (966bp) protein (322aa)
Putative Response regulator n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGH0_9BACT
putative response regulator
Putative Response regulator {ECO:0000313|EMBL:CBK42357.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_scaffold_655_30
Selaginella moellendorffii, Selaginella, Selaginellales, Lycopodiidae, Streptophyta, Viridiplantae

Not on your lists

27839..30148
DNA (2310bp) protein (770aa)
Putative uncharacterized protein n=1 Tax=Selaginella moellendorffii RepID=D8S0K5_SELML
Putative uncharacterized protein {ECO:0000313|EMBL:EFJ21945.1}; TaxID=88036 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; S
hypothetical protein
Displaying items 1-30 of 33 in total

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