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13_1_40cm_scaffold_835

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_835_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..969)
DNA (969bp) protein (323aa)
putative glycerol-3-phosphate acyltransferase PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=GWA2_Rokubacteria_73_35_curated
Phosphate acyltransferase id=2638116 bin=GWF2_Methylomirabilis_70_14 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
plsX; acyl-(acyl carrier protein)--phosphate acyltransferase
13_1_40cm_scaffold_835_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists


comp(1009..1191)
DNA (183bp) protein (61aa)
rpmF; 50S ribosomal protein L32 RpmF Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
50S ribosomal protein L32 id=4343491 bin=GWA2_Methylomirabilis_73_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpmF; 50S ribosomal protein L32 RpmF
13_1_40cm_scaffold_835_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1210..1719)
DNA (510bp) protein (170aa)
hypothetical protein; K07040 uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4343489 bin=GWA2_Methylomirabilis_73_35 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_835_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

1901..2743
DNA (843bp) protein (281aa)
endopeptidase htpX (EC:3.4.24.-); K03799 heat shock protein HtpX [EC:3.4.24.-] id=14625131 bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
endopeptidase htpX (EC:3.4.24.-); K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=CSP1_6_Rokubacteria
endopeptidase htpX (EC:3.4.24.-)
13_1_40cm_scaffold_835_5
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2780..4171
DNA (1392bp) protein (464aa)
fixN; cytochrome-c oxidase fixN chain (EC:1.9.3.1)
Cytochrome-c oxidase fixN chain n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AF88_RHIFH
Cytochrome oxidase {ECO:0000313|EMBL:EYS86810.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
13_1_40cm_scaffold_835_6
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4168..5700
DNA (1533bp) protein (511aa)
Peptidase S41 n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QRF5_RALPI
peptidase S41
Tax=BJP_IG2102_Gammaproteobacteria_62_140
13_1_40cm_scaffold_835_7
unknown

Not on your lists

5703..5867
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_40cm_scaffold_835_8
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5848..6006
DNA (159bp) protein (53aa)
Uncharacterized protein {ECO:0000313|EMBL:EYS86807.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-
13_1_40cm_scaffold_835_9
unknown

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6003..6101
DNA (99bp) protein (33aa)

This feature has no annotations

13_1_40cm_scaffold_835_10
unknown

Not on your lists

6098..6190
DNA (93bp) protein (31aa)

This feature has no annotations

13_1_40cm_scaffold_835_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

6333..7151
DNA (819bp) protein (273aa)
Cytochrome c oxidase caa3 assembly factor family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WW54_9SPHN
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein
13_1_40cm_scaffold_835_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7156..7875
DNA (720bp) protein (240aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4343485 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
heme exporter protein CcmA
13_1_40cm_scaffold_835_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7872..8549
DNA (678bp) protein (226aa)
Cytochrome c-type biogenesis protein CcmB id=4343483 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Heme exporter, protein B Tax=GWA2_Rokubacteria_73_35_curated
Heme exporter, protein B
13_1_40cm_scaffold_835_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8554..9201
DNA (648bp) protein (216aa)
ccmC; heme ABC transporter (heme exporter protein C), permease protein (cytochrome c biogenesis) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Heme ABC transporter (Heme exporter protein C), permease protein (Cytochrome c biogenesis) id=4343481 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ccmC; heme ABC transporter (heme exporter protein C), permease protein (cytochrome c biogenesis)
13_1_40cm_scaffold_835_15
unknown

Not on your lists

9201..9464
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_scaffold_835_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9461..9895
DNA (435bp) protein (145aa)
ccmE; cytochrome c-type biogenesis protein CcmE Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ccmE; cytochrome c-type biogenesis protein CcmE id=14625136 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ccmE; cytochrome c-type biogenesis protein CcmE
13_1_40cm_scaffold_835_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9892..11823
DNA (1932bp) protein (644aa)
Cytochrome c-type biogenesis protein cycK n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFW7_9BACT
cycK; cytochrome c-type biogenesis protein cycK Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cycK; cytochrome c-type biogenesis protein cycK
13_1_40cm_scaffold_835_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11778..12254
DNA (477bp) protein (159aa)
ccmG; periplasmic thioredoxin (cytochrome c biogenesis) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ccmG; periplasmic thioredoxin (cytochrome c biogenesis) id=14625138 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ccmG; periplasmic thioredoxin (cytochrome c biogenesis)
13_1_40cm_scaffold_835_19
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

12270..13394
DNA (1125bp) protein (375aa)
Serine protease do-like (EC:3.4.21.-)
Putative Serine protease do-like {ECO:0000313|EMBL:CBE70188.1}; EC=3.4.21.- {ECO:0000313|EMBL:CBE70188.1};; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" sour
Putative Serine protease do-like n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMR6_9BACT
13_1_40cm_scaffold_835_20
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(13391..13867)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAR2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF63097.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
hypothetical protein
13_1_40cm_scaffold_835_21
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13955..14182
DNA (228bp) protein (76aa)
Uncharacterized protein n=2 Tax=Anaeromyxobacter RepID=B4UFY7_ANASK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG72255.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_scaffold_835_22
unknown

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14196..14771
DNA (576bp) protein (192aa)

This feature has no annotations

13_1_40cm_scaffold_835_23
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

comp(14776..15711)
DNA (936bp) protein (312aa)
Predicted Co/Zn/Cd cation transporters n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5I3_SALRM
cation diffusion facilitator family transporter Tax=RBG_16_Acidobacteria_64_8_curated
mmt1; Co/Zn/Cd cation transporters
13_1_40cm_scaffold_835_24
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

15901..16434
DNA (534bp) protein (178aa)
Formate dehydrogenase, alpha subunit n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAE5_SPHTD
formate dehydrogenase, alpha subunit
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:ACZ40788.1}; Flags: Precursor;; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobac
13_1_40cm_scaffold_835_25
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

16489..19143
DNA (2655bp) protein (885aa)
Formate dehydrogenase, alpha subunit n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAE5_SPHTD
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:ACZ40788.1}; Flags: Precursor;; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobac
formate dehydrogenase, alpha subunit
13_1_40cm_scaffold_835_26
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

19286..20107
DNA (822bp) protein (274aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAE6_SPHTD
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ACZ40789.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacter
13_1_40cm_scaffold_835_27
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

20085..21008
DNA (924bp) protein (308aa)
Polysulphide reductase NrfD n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAE7_SPHTD
Polysulfide reductase NrfD
Polysulphide reductase NrfD {ECO:0000313|EMBL:ACZ40790.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" s
13_1_40cm_scaffold_835_28
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21005..21238
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF05129.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
13_1_40cm_scaffold_835_29
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

21235..22119
DNA (885bp) protein (295aa)
Formate dehydrogenase accessory protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAE9_SPHTD
formate dehydrogenase accessory protein
Formate dehydrogenase accessory protein {ECO:0000313|EMBL:ACZ40792.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaer
13_1_40cm_scaffold_835_30
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

22116..22448
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAF0_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ40793.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sourc
Displaying items 1-30 of 67 in total

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