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13_1_40cm_scaffold_910

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_910_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1..708
DNA (708bp) protein (236aa)
major facilitator superfamily protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Arabinose efflux permease family protein id=1866162 bin=GWA2_Methylomirabilis_73_35 species=Streptomyces pristinaespiralis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_910_2
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

958..2616
DNA (1659bp) protein (553aa)
Di-heme cytochrome-c peroxidase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U8P7_MYXSD
di-heme cytochrome-c peroxidase rbh
Di-heme cytochrome-c peroxidase {ECO:0000313|EMBL:AGC43917.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source
13_1_40cm_scaffold_910_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2691..3215)
DNA (525bp) protein (175aa)
Putative acetyltransferase protein id=2497913 bin=GWC2_Methylomirabilis_70_24 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
N-acetyltransferase GCN5 Tax=GWA2_Rokubacteria_70_23_curated
GCN5 family acetyltransferase
13_1_40cm_scaffold_910_4
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3295..4194
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2ET83_CLOS4
Uncharacterized protein {ECO:0000313|EMBL:ERI96266.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 /
ytlA; putative ABC transporter substrate-binding protein
13_1_40cm_scaffold_910_5
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(4191..5147)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035D0251
cyclase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
cyclase
13_1_40cm_scaffold_910_6
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(5200..6156)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035D0251
cyclase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
cyclase
13_1_40cm_scaffold_910_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6229..7017)
DNA (789bp) protein (263aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4Q7_SPHTD
Enoyl-CoA hydratase/isomerase Tax=GWA2_Rokubacteria_73_35_curated
Enoyl-CoA hydratase/isomerase
13_1_40cm_scaffold_910_8
unknown

Not on your lists

comp(7127..7531)
DNA (405bp) protein (135aa)

This feature has no annotations

13_1_40cm_scaffold_910_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

7599..8363
DNA (765bp) protein (255aa)
ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DBZ5_BRAJP
ATP-dependent DNA ligase
13_1_40cm_scaffold_910_10
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

8380..9240
DNA (861bp) protein (287aa)
hypothetical protein, partial n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036892EA
3-oxoacyl-ACP reductase Tax=RBG_16_NC10_65_8_curated
3-oxoacyl-ACP reductase
13_1_40cm_scaffold_910_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9304..10467
DNA (1164bp) protein (388aa)
Major facilitator superfamily MFS_1 n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCL8_HYPSM
Variovorax paradoxus strain MEDvA23 contig_32, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31512.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
major facilitator superfamily protein
13_1_40cm_scaffold_910_12
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10520..11035)
DNA (516bp) protein (172aa)
RhtB family transporter n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003165813
RhtB family transporter {ECO:0000313|EMBL:ESJ25289.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HP
RhtB family transporter
13_1_40cm_scaffold_910_13
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11047..11346)
DNA (300bp) protein (100aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW97051.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
id=1956518 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_40cm_scaffold_910_14
unknown

Not on your lists

comp(11350..11568)
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_scaffold_910_15
unknown

Not on your lists

comp(11706..11918)
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_scaffold_910_16
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11988..13109)
DNA (1122bp) protein (374aa)
NHL repeat-containing protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CHD9_9RHIZ
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ46459.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Me
NHL repeat containing protein
13_1_40cm_scaffold_910_17
unknown

Not on your lists

comp(13125..13589)
DNA (465bp) protein (155aa)

This feature has no annotations

13_1_40cm_scaffold_910_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13713..14453
DNA (741bp) protein (247aa)
Lyase-like protein n=1 Tax=Glaciecola sp. (strain 4H-3-7+YE-5) RepID=F4AMD9_GLAS4
lyase -like protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
lyase -like protein
Displaying 18 items

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