ggKbase home page

13_1_40cm_scaffold_9171

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_9171_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3..374)
DNA (372bp) protein (124aa)
argininosuccinate lyase; K01755 argininosuccinate lyase [EC:4.3.2.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Argininosuccinate lyase id=4231026 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
argininosuccinate lyase
13_1_40cm_scaffold_9171_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(371..1042)
DNA (672bp) protein (224aa)
1-acyl-sn-glycerol-3-phosphate acyltransferases id=4231028 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
1-acyl-sn-glycerol-3-phosphate acyltransferase Tax=GWA2_Rokubacteria_73_35_curated
1-acyl-sn-glycerol-3-phosphate acyltransferase
13_1_40cm_scaffold_9171_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1064..2053)
DNA (990bp) protein (330aa)
aminodeoxychorismate lyase; K07082 UPF0755 protein Tax=GWA2_Rokubacteria_73_35_curated
aminodeoxychorismate lyase id=14627099 bin=bin7_NC10_sister species=Thermodesulfatator atlanticus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin7_NC10_sister organism_group=NC10
aminodeoxychorismate lyase
13_1_40cm_scaffold_9171_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2170..3162
DNA (993bp) protein (331aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=GWA2_Rokubacteria_73_35_curated
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha id=4231232 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_9171_5
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3272..4270
DNA (999bp) protein (333aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LPA6_SYNFM
TRAP dicarboxylate transporter subunit DctP Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
TRAP dicarboxylate transporter subunit DctP
13_1_40cm_scaffold_9171_6
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4311..4751
DNA (441bp) protein (147aa)
Tripartite ATP-independent periplasmic transporter, DctQ component n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LPA5_SYNFM
tripartite ATP-independent periplasmic transporter DctQ Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
tripartite ATP-independent periplasmic transporter DctQ
13_1_40cm_scaffold_9171_7
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4756..6045
DNA (1290bp) protein (430aa)
TRAP dicarboxylate transporter, DctM subunit id=4895603 bin=GWC2_Syntrophus__56_31 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
TRAP dicarboxylate transporter subunit DctM Tax=GWC2_Syntrophus_56_31_curated
TRAP dicarboxylate transporter subunit DctM
13_1_40cm_scaffold_9171_8
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6091..6852
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037D6885
Uncharacterized protein {ECO:0000313|EMBL:KGF69776.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
short chain dehydrogenase family protein
13_1_40cm_scaffold_9171_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7057..8013)
DNA (957bp) protein (319aa)
LL-diaminopimelate aminotransferase apoenzyme (EC:2.6.1.83); K10206 LL-diaminopimelate aminotransferase [EC:2.6.1.83] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dapL1; LL-diaminopimelate aminotransferase DapL (EC:2.6.1.83)
L,L-diaminopimelate aminotransferase id=4231234 bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_9171_10
unknown

Not on your lists

comp(8047..8511)
DNA (465bp) protein (155aa)

This feature has no annotations

Displaying 10 items

View Taxonomy