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13_1_40cm_scaffold_10090

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_10090_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(49..1434)
DNA (1386bp) protein (462aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=GWC2_Rokubacteria_70_16_curated
Amidase id=4599606 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidase
13_1_40cm_scaffold_10090_2
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1515..2042
DNA (528bp) protein (176aa)
Cupin 2, conserved barrel domain protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V6R7_SPHWW
cupin
Cupin 2, conserved barrel domain protein {ECO:0000313|EMBL:ABQ67983.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source
13_1_40cm_scaffold_10090_3

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2039..3538
DNA (1500bp) protein (500aa)
Oligopeptide ABC transporter substrate-binding protein n=1 Tax=uncultured organism RepID=M1PVJ1_9ZZZZ
Oligopeptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:AGF93164.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
ABC transporter substrate-binding protein
13_1_40cm_scaffold_10090_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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3574..4383
DNA (810bp) protein (270aa)
dppB; dipeptide transport system permease DppB; K02033 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
dppB; dipeptide transport system permease DppB; K02033 peptide/nickel transport system permease protein id=14627052 bin=bin7_NC10_sister species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
binding-protein-dependent transport system inner membrane protein
13_1_40cm_scaffold_10090_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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4380..5297
DNA (918bp) protein (306aa)
Binding-protein-dependent transport systems inner membrane component id=4948703 bin=GWC2_Methylomirabilis_70_24 species=Oceanithermus profundus genus=Oceanithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
gsiD; Oligopeptide ABC transporter permease protein
13_1_40cm_scaffold_10090_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5315..6091)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00035FF99D
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
13_1_40cm_scaffold_10090_7
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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6171..6599
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TWI2_9PROT
cupin Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
cupin
13_1_40cm_scaffold_10090_8
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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6791..7495
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7U4_9BACT
hypothetical protein Tax=RBG_16_Gamma2_60_9_curated
hypothetical protein
13_1_40cm_scaffold_10090_9
unknown

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7616..8071
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_40cm_scaffold_10090_10
CG_Elusi_01, Elusimicrobia, Elusimicrobia, Bacteria

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8546..8914
DNA (369bp) protein (123aa)
hypothetical protein Tax=CG_Elusi_01
putative transposase; K07494 putative transposase id=14624116 bin=bin5_DeltaP species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
Displaying 10 items

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