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13_1_40cm_scaffold_11114

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_11114_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(1..843)
DNA (843bp) protein (281aa)
ABC-3 protein; K02075 zinc/manganese transport system permease protein id=14627589 bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
ABC-3 protein; K02075 zinc/manganese transport system permease protein Tax=CSP1_6_Rokubacteria
ABC-3 protein
13_1_40cm_scaffold_11114_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(850..1119)
DNA (270bp) protein (90aa)
periplasmic solute binding protein; K09815 zinc transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
periplasmic solute binding protein; K09815 zinc transport system substrate-binding protein id=14627590 bin=bin7_NC10_sister species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
periplasmic solute binding protein
13_1_40cm_scaffold_11114_3
unknown

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1289..1546
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_scaffold_11114_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(1699..2805)
DNA (1107bp) protein (369aa)
acetamidase/formamidase id=14627591 bin=bin7_NC10_sister species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
acetamidase/formamidase Tax=CSP1_6_Rokubacteria
acetamidase/formamidase
13_1_40cm_scaffold_11114_5
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

2863..3465
DNA (603bp) protein (201aa)
isochorismatase hydrolase; K08281 nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
isochorismatase hydrolase; K08281 nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] id=14627128 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
nicotinamidase
13_1_40cm_scaffold_11114_6
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

3462..4625
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6DABF
hypothetical protein Tax=CG_Arma_02
hypothetical protein
13_1_40cm_scaffold_11114_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4636..5133
DNA (498bp) protein (166aa)
type 11 methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Methyltransferase type 11 id=1884749 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
type 11 methyltransferase
13_1_40cm_scaffold_11114_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5137..5610
DNA (474bp) protein (158aa)
Putative uncharacterized protein id=1884751 bin=GWA2_Methylomirabilis_73_35 species=Methanoculleus marisnigri genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_11114_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5607..6053
DNA (447bp) protein (149aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=1884751 bin=GWA2_Methylomirabilis_73_35 species=Methanoculleus marisnigri genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_11114_10
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6058..8016)
DNA (1959bp) protein (653aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B7F0_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ91471.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum
13_1_40cm_scaffold_11114_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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8371..8829
DNA (459bp) protein (153aa)
RlpA-like lipoprotein id=2336348 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
rare lipoprotein A
13_1_40cm_scaffold_11114_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8836..9903)
DNA (1068bp) protein (356aa)
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase group 1 id=1884755 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyl transferase
13_1_40cm_scaffold_11114_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9947..10537
DNA (591bp) protein (197aa)
membrane-associated protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
SNARE associated Golgi protein-like protein id=2913053 bin=GWC2_Methylomirabilis_70_16 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
DedA protein family
13_1_40cm_scaffold_11114_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10632..11927
DNA (1296bp) protein (432aa)
integral membrane sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Integral membrane sensor signal transduction histidine kinase id=1884757 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_11114_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11920..13614
DNA (1695bp) protein (565aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=1884909 bin=GWA2_Methylomirabilis_73_35 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sigma-54 dependent DNA-binding response regulator; K07713 two-component system, NtrC family, response regulator HydG Tax=GWA2_Rokubacteria_73_35_curated
two component sigma-54 specific Fis family transcriptional regulator
13_1_40cm_scaffold_11114_16
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(13611..13823)
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D437E
putative outer membrane protein Tax=CSP1_5_NC10
outer membrane protein
13_1_40cm_scaffold_11114_17
unknown

Not on your lists

14082..14324
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_scaffold_11114_18
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14359..14703
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. HPB0071 RepID=N2J3Q8_9PSED
integral membrane sensor hybrid histidine kinase Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
integral membrane sensor hybrid histidine kinase
Displaying 18 items

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