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13_1_40cm_scaffold_1274

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1274_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1..819
DNA (819bp) protein (273aa)
id=3202777 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
id=3202777 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_1274_2
unknown

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comp(812..2017)
DNA (1206bp) protein (402aa)

This feature has no annotations

13_1_40cm_scaffold_1274_3
unknown

Not on your lists

comp(2060..2326)
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_scaffold_1274_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2475..3587
DNA (1113bp) protein (371aa)
2-nitropropane dioxygenase; K00459 nitronate monooxygenase [EC:1.13.12.16] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
2-nitropropane dioxygenase NPD n=1 Tax=Planococcus antarcticus DSM 14505 RepID=I4X689_9BACL
2-nitropropane dioxygenase NPD
13_1_40cm_scaffold_1274_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3584..4600
DNA (1017bp) protein (339aa)
luciferase family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Luciferase family protein id=3646803 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
luciferase family protein
13_1_40cm_scaffold_1274_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4638..5879
DNA (1242bp) protein (414aa)
crotonyl-CoA reductase; K14446 crotonyl-CoA carboxylase/reductase [EC:1.3.1.85] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Crotonyl-CoA reductase id=3646800 bin=GWC2_Methylomirabilis_70_16 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
crotonyl-CoA reductase
13_1_40cm_scaffold_1274_7
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5884..7167)
DNA (1284bp) protein (428aa)
Putative uncharacterized protein n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RBJ6_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EGK72167.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatili
hypothetical protein
13_1_40cm_scaffold_1274_8
unknown

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comp(7230..7619)
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_40cm_scaffold_1274_9
GWF2_Elusimicrobia_62_30_curated, Elusimicrobia, Bacteria

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comp(7631..8227)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P8Y6_AROAE
hypothetical protein Tax=GWF2_Elusimicrobia_62_30_curated
hypothetical protein
13_1_40cm_scaffold_1274_10
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(8686..9213)
DNA (528bp) protein (176aa)
hypothetical protein
alias=16ft_combo_ws3_scaffold_11273_12 Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
alias=16ft_combo_ws3_scaffold_11273_12 id=14625152 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_1274_11
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(9304..9828)
DNA (525bp) protein (175aa)
alias=16ft_combo_ws3_scaffold_11273_12 Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
alias=16ft_combo_ws3_scaffold_11273_12 id=14625152 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_1274_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

10155..11402
DNA (1248bp) protein (416aa)
6-phosphofructokinase (EC:2.7.1.11) Tax=GWC2_Rokubacteria_70_16_curated
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase id=3646677 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_1274_13
unknown

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comp(11423..11812)
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_40cm_scaffold_1274_14
unknown

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comp(11887..12114)
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_scaffold_1274_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12176..12967)
DNA (792bp) protein (264aa)
NUDIX hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NTP pyrophosphohydrolases including oxidative damage repair enzymes id=4379942 bin=GWA2_Methylomirabilis_73_35 species=uncultured gamma proteobacterium HF4000_19M20 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NUDIX hydrolase
13_1_40cm_scaffold_1274_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13023..13487
DNA (465bp) protein (155aa)
transcription regulator Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Endoribonuclease L-PSP id=4379943 bin=GWA2_Methylomirabilis_73_35 species=Flavobacteria bacterium MS024-2A genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
endoribonuclease L-PSP
13_1_40cm_scaffold_1274_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

13536..14741
DNA (1206bp) protein (402aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3)
putative two-component hybrid sensor and regulator Tax=GWC2_Rokubacteria_70_16_curated
Putative two-component hybrid sensor and regulator id=4232695 bin=GWC2_Methylomirabilis_70_16 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_1274_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14738..14890
DNA (153bp) protein (51aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=4379973 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1274_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14949..17288
DNA (2340bp) protein (780aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4) Tax=GWA2_Rokubacteria_73_35_curated
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein id=4734635 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1274_20
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17285..18154
DNA (870bp) protein (290aa)
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGE1_THEM7
molybdopterin dehydrogenase FAD-binding protein
Molybdopterin dehydrogenase FAD-binding protein {ECO:0000313|EMBL:ADU51593.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermae
13_1_40cm_scaffold_1274_21
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18380..18853
DNA (474bp) protein (158aa)
carbon monoxide dehydrogenase (EC:1.2.99.2)
(2Fe-2S)-binding protein {ECO:0000313|EMBL:ETW97828.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
(2Fe-2S)-binding protein id=24480318 bin=RBG_19FT_COMBO_GAL15_69_19 species=Nocardia sp. 348MFTsu5.1 genus=Nocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
13_1_40cm_scaffold_1274_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

18853..19635
DNA (783bp) protein (261aa)
PAS sensor protein id=4915483 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
multi-sensor signal transduction histidine kinase Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_scaffold_1274_23
unknown

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20241..20429
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_scaffold_1274_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(20426..21238)
DNA (813bp) protein (271aa)
Periplasmic binding protein id=4379975 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
periplasmic binding protein Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter substrate-binding protein
13_1_40cm_scaffold_1274_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(21291..21473)
DNA (183bp) protein (61aa)
hypothetical protein id=4379977 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_scaffold_1274_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(21483..21851)
DNA (369bp) protein (123aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4379979 bin=GWA2_Methylomirabilis_73_35 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1274_27
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

21869..23455
DNA (1587bp) protein (529aa)
PHP C-terminal domain protein id=4426899 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
phP C-terminal domain-containing protein Tax=GWC2_Rokubacteria_70_16_curated
phP C-terminal domain-containing protein
13_1_40cm_scaffold_1274_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

23469..23879
DNA (411bp) protein (137aa)
RNA-binding protein RNP-3 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
RNP-1 like RNA-binding protein id=1884756 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RNP-1 like RNA-binding protein, Glycine-rich
Displaying 28 items

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