ggKbase home page

13_1_40cm_scaffold_1171_1

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: 1..1965

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 655.0
  • Bit_score: 1037
  • Evalue 0.0
DNA topoisomerase I (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 673.0
  • Bit_score: 673
  • Evalue 4.80e-191
DNA topoisomerase id=3919910 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 656.0
  • Bit_score: 1022
  • Evalue 1.50e-295

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1965
CTCGCCCAGGAGTTGCCGATCGACAAGAAGAACGTCTACCGCGTGACGTTCAACGAGATCACCGAGCGCGCCGTGAAGTCGGCCTTCCTGCAGCCGGGCAAGATCGATCTCAAGAAGGTCGACGCCCAGCAGGCCCGGCGCATCCTCGATCGCCTGGTCGGCTACAGTCTGTCGCCACTCCTGTGGGACAAGGTCCAGCGCGGACTTTCCGCCGGCCGCGTCCAGTCCGTGGCGGTTCGCCTCATCGTCGATCGCGAGCGCGAGGTCGTGGCCTTCCGGCCGGAAGAGTACTGGTCGCTCCACGCGCGGCTCGAGGCGAAGCATCCACCCACGTTCGTGGCCACGCTGCGCGAGGTGGCCGGCGAGAAGGCGGACCTGCGCAACGAGGAAGCGACGCGCGCCGTCATGGCGTCGCTCGACGGCGCGACCTTCGTGGTCAAGACGGTCACCCGCGGCGAGCGCCGCCGCCATCCAGCGCCCCCGTTCATCACGTCCACGCTCCAGCAGGAGGCGGGACGGAAGCTCGGCTTTTCCGCGAAGAAGACGATGACGCTCGCCCAGCAGCTCTACGAGGGCATCGACATCGGCGAGCAGGGCGCCGTCGGTCTCATCACCTACATGCGGACGGACTCGGTGCGCATCGCCGCCGAGGCCCAGGCGCAAGCGCGTGACTGGGTCAGCGCCCGGCTCGGCACCGAGTATCTGCCCCAGAGCCCGCCCGTCTACAAGTCGCGGGGCAGCGCGCAGGAAGCCCACGAGGCGGTCCGGCCCTCGGACGTGACTCGCGAGCCGCGGCACATCACGCGCAATCTGAACAAGGACCAGCTCGCGCTCTACCGTCTGATCTGGGAGCGCTTCTTGGCCAGCCAGATGAACGCCGCCGTCTATGACACGGTCAGCGCCGACATCGAGGCCGGCCGCACGATCTTCCGCGCCCAGGGCCAGACGCTCAAGTTCAAAGGCTTCACCGCCGTCTACGTCGAGAGCCGCGAAGAGGAGACGACGGAGGACGAGGATGCCGAGCGGGCGATGCCGATGCTGGAGCAAGGCGAGCGTCTGAAGCTCTTGGGCCTCGATCCCAAGCAGCATTTCACCCAGCCGCCGCCGCGCTACACGGAAGCCGCGCTCATCAAGGCGCTGGAGGAGCTCGGGATCGGCCGGCCCTCCACCTACGCCTCCATCCTGGGCACGATCATCAACGACCGTGGCTACGTTCACCGCGAGCGGCGGACGCTCTTCCCCACCGAGCTCGGTATGGCCGTCACCGACAAGCTCATTCCCTACTTCGCCGACATCATGAACGTCGAGTTCACGGCCCAGATGGAGGGCGAGCTCGACAAGGTGGAGGAGGGTGAGCTCAAGTGGGTGGACGCGGTGGAGGACTTCTACAAGCCCTTCACGGTCGACCTCGAGCGCGCCAAGCAGGAGATGAAGAGCGAGAAGGCCGGCGAGCCGACGGGCGAGGCCTGCCCGGAGTGTGGCGAGGAGCTCCTCAAGCGCCGTGGTCGCTTCGGCCCCTTCATCGCGTGCTCGGCGTATCCGGAGTGTCGCTACACACGCAACCTGAACGGTGAAGGCAAGGTCGAGGACGAGACGACGAACGAGACGTGTGCGACCTGCGGCCGGCCGATGGTGATCAAGCACGGGCGCTTCGGCAAATTCATCGCCTGCTCGGGCTACCCGGAATGCAAGACGACCAAGCCCGTGACGCTCGGGATCGCGTGCCCCGAGTCGGGATGCTCGGGCGAGCTGGTCCAGCGGCGCTCCAAGCGCGGCCGCACGTTCTACGGTTGTTCGGCCTACCCGACGTGCAAGTTCGTGCTGTGGCAGCGGCCGGTGGCGGAGCCGTGCCCGAAGTGCGGGGCGCCCTTCATCGTCGAGCGCGTGGCCCGCGGCCGGACGACACGGTCCTGCGTGCGCGAGGGCTGTGACTTCCGGCGGGAGGTCGAACAGCCGGTGGCATGA
PROTEIN sequence
Length: 655
LAQELPIDKKNVYRVTFNEITERAVKSAFLQPGKIDLKKVDAQQARRILDRLVGYSLSPLLWDKVQRGLSAGRVQSVAVRLIVDREREVVAFRPEEYWSLHARLEAKHPPTFVATLREVAGEKADLRNEEATRAVMASLDGATFVVKTVTRGERRRHPAPPFITSTLQQEAGRKLGFSAKKTMTLAQQLYEGIDIGEQGAVGLITYMRTDSVRIAAEAQAQARDWVSARLGTEYLPQSPPVYKSRGSAQEAHEAVRPSDVTREPRHITRNLNKDQLALYRLIWERFLASQMNAAVYDTVSADIEAGRTIFRAQGQTLKFKGFTAVYVESREEETTEDEDAERAMPMLEQGERLKLLGLDPKQHFTQPPPRYTEAALIKALEELGIGRPSTYASILGTIINDRGYVHRERRTLFPTELGMAVTDKLIPYFADIMNVEFTAQMEGELDKVEEGELKWVDAVEDFYKPFTVDLERAKQEMKSEKAGEPTGEACPECGEELLKRRGRFGPFIACSAYPECRYTRNLNGEGKVEDETTNETCATCGRPMVIKHGRFGKFIACSGYPECKTTKPVTLGIACPESGCSGELVQRRSKRGRTFYGCSAYPTCKFVLWQRPVAEPCPKCGAPFIVERVARGRTTRSCVREGCDFRREVEQPVA*