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13_1_40cm_scaffold_1171_26

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: 27515..28438

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 305.0
  • Bit_score: 494
  • Evalue 9.30e-137
LysR substrate-binding protein id=4115284 bin=GWA2_Methylomirabilis_73_35 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 303.0
  • Bit_score: 482
  • Evalue 2.60e-133
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 297.0
  • Bit_score: 271
  • Evalue 2.60e-70

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Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 924
GTGCATCTGGAGACGCTGCGCCTGTTCTGCGACATCGTCCGTCTCCGCTCGTTCTCCCGGGGCGCCGAGCAGAGCTTCGTCTCGCAGTCGGCAGCCAGCCAGGCCGTGCAGCAGCTCGAGCGCGACCTGGGGGTGGCCCTGGTGGACCGGACGAAGCGGCCGTTCGTCGTGACTCCCGAAGGGCAAACGTTCTACGAGGCCTGCCGATCGCTCCTCGAGACATGGGAGAAGGCCAGGGCCGAGGTCGCCTCGGTGAAGGCTCGGGTCGACGGTACGGTGCGGGTCGCCGCGATCTACTCGGTCGGCCTTCACGACATGAGCCATCACTTGCAGCGTTTCATGTCCCTCTACCCGAACGCGCGCGTCCAGCTCGAGTGCCTGCATCCCCACAAGGTCGTGGAGGCGGTGCTCAGGGATGAGGCCGACGTGGGGATCATGTCGTATCCGCCGACCGATCGCGCGCTCAGCGTGGTGCCGCTCCGGGCCGAGCCCATGGCCTTCGTGTGCCATCCGAATCACCGGCTGGCCCGGCGCCGTCTCGTCGCGCCCCACGACCTGAATGGCGAGCCGTTCGTGGCCTTCGACCGCGAGCTGACGATCAGGAAGGCGATCGATCGGGCACTGCGCCAGCGAGGCGTGAAGGCGAACATCGTCATGGAGTTCGACAACATCGAGACGATCAAGCAGGCCATCATGATCGCCGCCGGAGTCAGCATCCTGCCGCGTCACACCGTGGAGAAGGAAGCCAGCATCCGGACGCTGGCCGTCCTGCCGTTCGGGATCGCTGACCTCGTGCGCCCCGTCGGCATCATCCATCGCCGGCAGAAGCCGCTCACACCCTCGGTGAACCGCTTCGTCGAGCTTCTGCAGGCTTCGAACGGCGACACGCCGCCGGCCCGCCAGCGCGAGACCCGCCCTCGCTGA
PROTEIN sequence
Length: 308
VHLETLRLFCDIVRLRSFSRGAEQSFVSQSAASQAVQQLERDLGVALVDRTKRPFVVTPEGQTFYEACRSLLETWEKARAEVASVKARVDGTVRVAAIYSVGLHDMSHHLQRFMSLYPNARVQLECLHPHKVVEAVLRDEADVGIMSYPPTDRALSVVPLRAEPMAFVCHPNHRLARRRLVAPHDLNGEPFVAFDRELTIRKAIDRALRQRGVKANIVMEFDNIETIKQAIMIAAGVSILPRHTVEKEASIRTLAVLPFGIADLVRPVGIIHRRQKPLTPSVNRFVELLQASNGDTPPARQRETRPR*