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13_1_40cm_scaffold_1444_18

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: comp(16678..16953)

Top 3 Functional Annotations

Value Algorithm Source
hupA1; DNA-binding protein HU 1; K05788 integration host factor subunit beta Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 91.0
  • Bit_score: 175
  • Evalue 2.80e-41
Integration host factor, beta subunit, putative id=3360720 bin=GWA2_Methylomirabilis_73_35 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 92.0
  • Bit_score: 174
  • Evalue 5.90e-41
histone family protein DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 91.0
  • Bit_score: 121
  • Evalue 1.30e-25

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 276
ATGACAAAAGCCGAGCTGATCGACGAGGTCTCCAAGCTCTCCAACCTGACGAAAAAAGAGACCGAGACCATCGTCAACACGATCTTCGACAACATTACTGACGCGTTGGCCAAGGGCGACAAGGTCGAGCTTCGTGGCTTCGGCAGCTTCCGGATCCGCTACCGGAACTCGCGCAAGGGACGTAACCCGAAGACCGGCAGCGCCGTCGACGTGCCCGAGAAGCGGGTGCCGTTCTTCAAGGTCGGCAAGCGCCTCAGGGAACTCGTCAACACGTGA
PROTEIN sequence
Length: 92
MTKAELIDEVSKLSNLTKKETETIVNTIFDNITDALAKGDKVELRGFGSFRIRYRNSRKGRNPKTGSAVDVPEKRVPFFKVGKRLRELVNT*