ggKbase home page

13_1_40cm_scaffold_1545_14

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: 13685..15100

Top 3 Functional Annotations

Value Algorithm Source
two component, sigma54 specific, transcriptional regulator, Fis family; K07714 two-component system, NtrC family, response regulator AtoC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 449.0
  • Bit_score: 682
  • Evalue 3.70e-193
Two component system response regulator, sigma54-specific id=4571215 bin=GWF2_Methylomirabilis_70_14 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 468.0
  • Bit_score: 651
  • Evalue 8.40e-184
two component system response regulator, sigma54-specific similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 456.0
  • Bit_score: 431
  • Evalue 3.00e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1416
ATGGCCCTCCGGGCAGCCGAGGCGAACGAAGCGTCCGCGGGCGTGCGGCCCGTCATCCTGGTCGTCGACGACGATCCGGGCGTTCGTGAGTCGTTCCGGCTGATCCTCGAGGACGCGTACGATCTGCTGGAGGCCGGCGACGGCCGCCAGGCGCTCGCGCGCCTTCGCACCAGCCTCGTCGACCTCGTGCTCCTCGACATCCGCCTGCCCGAGATGGACGGCATCGAAGTGCTCGAGCGAATCAAGGCCGTGGACGACGGTGTCGAGGTGATCCTCGTCACCGCGGTCAAGACCGTCCGCACCGCCGTCGATGCCATGAAGCTCGGCGCCTTCGATTACCTGACGAAGCCCTTCGACGAGGATGAGCTGCTCTCGCTCATCCATCGCGCGCTCGAGAAGCGCTCGCTCGAGCGGGAGGTCGCCTTCCTCCGCTCGGAGCTGGCCCGCCAGCACGACTTCGACGAGCTGATCGGCCAGCATCCCGAGATGCAGAAGCTCTACCGCCTCATCTCGCAGGTCGCGCGCACCACCACCACCGTGGTCATCTCCGGCGAGAGCGGCACCGGCAAGGAGCTGATCGCCCGTGCGATTCACCGGCAGGGCCCGCGCCGCGACAAGCCGTTCGTGGCGGTCAATCCGGCGGCGCTCTCGGACTCTCTCGTCGAATCCGAGCTGTTCGGTCACGAGAAAGGCGCCTTCACGGGAGCGTACCAGCGCAAGCTCGGCCGCTTCGAGCTGGCCCAGGGCGGCACGCTGTTCCTCGACGAGATCAGCTCGCTCAAGCCGGAGCTGCAAGCCAAGCTCCTCCGGGTGCTCCAGGAGCGCGAGGTAGAGCGTGTGGGAGGGACGCGGCCCGTCCGCATCGACGCCCGCATCATCGTGGCCACCAACGTGGATCTGCGGCAGGCGGTGGCCGACGGGAAGTTCCGCGAGGACCTCTACTACCGCCTGAATGTCGTGCCCATCGCGGTGCCGCCGCTGCGCGAGCGCCGTGACGACGTCCCGTTGCTGGTCGCCCACTTCGTGCGGCGCTACACCCAGGCCTTCAACAAGCGGATCGAGGGCTGGACGCCGGAGGCCCTCAAAGCCCTGCACGATTACCCGTGGCCGGGGAACGTCCGTGAGCTCCAGAACGTCATCGAGCGCGTGGTGGCGCTCGTCGATGGGCCGGTCGTCGGCCTCAACGATGTGCCCCTCGATCTGCTGCTGCCCGACTCCCGCGCCCGCCTTCGCGATACGGCCATGCTGCCGCTGAAGCAGGCCACCGAGGAGTTCGAGCGACAGATCGTCACCCGCGTGCTGGAGCGCGTGCACTGGAACCGGAGCGAGGCCGCGCGCATCCTCGGTCTCCACCGCAATTCGCTGAAGCTCATGCTCGCCCGCTGGGGCCTCACGGGATCCGGCGCCGACGACTAG
PROTEIN sequence
Length: 472
MALRAAEANEASAGVRPVILVVDDDPGVRESFRLILEDAYDLLEAGDGRQALARLRTSLVDLVLLDIRLPEMDGIEVLERIKAVDDGVEVILVTAVKTVRTAVDAMKLGAFDYLTKPFDEDELLSLIHRALEKRSLEREVAFLRSELARQHDFDELIGQHPEMQKLYRLISQVARTTTTVVISGESGTGKELIARAIHRQGPRRDKPFVAVNPAALSDSLVESELFGHEKGAFTGAYQRKLGRFELAQGGTLFLDEISSLKPELQAKLLRVLQEREVERVGGTRPVRIDARIIVATNVDLRQAVADGKFREDLYYRLNVVPIAVPPLRERRDDVPLLVAHFVRRYTQAFNKRIEGWTPEALKALHDYPWPGNVRELQNVIERVVALVDGPVVGLNDVPLDLLLPDSRARLRDTAMLPLKQATEEFERQIVTRVLERVHWNRSEAARILGLHRNSLKLMLARWGLTGSGADD*