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13_1_40cm_scaffold_2001_7

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: 6181..7632

Top 3 Functional Annotations

Value Algorithm Source
Glycine betaine/L-proline ABC transporter permease and substrate-binding protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U2B6_MYXSD id=5224892 bin=16ft_combo_ws3_JS1 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 499.0
  • Bit_score: 411
  • Evalue 1.50e-111
ABC transporter permease; K05846 osmoprotectant transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.4
  • Coverage: 498.0
  • Bit_score: 552
  • Evalue 5.90e-154
glycine/betaine ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 492.0
  • Bit_score: 399
  • Evalue 1.70e-108

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1452
ATGACGCCACGCCGCCTCGCCGCGCTCCTCGCCATCGCGCTTGCCGCGCTGGGGCCTGCCGCCGCGTGGGCGGCGACGCCGGCCCGCGTCGGATCGAAGTCGTTCACCGAGAGCTACGTCGTCGCCGAGATCGTCGCCCAGGTGGCCGAGCAGGTCGGCGAGGCGCCGATGGAGCGCAAGCTCGGCCTGGGCGGAACCGGCATCGCCTACGGCGCGCTGGCGAGTGGCGAGATCGACATCTATCCGGAGTACACGGGCACGATCAGCCACGCCATCTTGAAGGACGCGTCGGTGACCACGGTCGACGCGTTGCGGGCGCGGCTGCGCCCTCTCGGCCTGACCATCAGCGACCCGCTCGGCTTCGCCAACACGTACGCGCTGGCCGTGGCTCGCGATACCGCCGCCCGACTCGGGCTGCGGACGATCAGCGACCTCGCACGCCATCCCGGGCTCTCCGCGGCCTTCGATGCAGGATTTCTCGAGCGTGACGATGGCTGGCCGGGATTGCGTCGGCACTACGGGCTGCAGCTCGCCCGCGTGATCGGCATGGAGCACGCGCTGACCTACCAGGCGGTGGCCAGCGGCCACGTGGACGTCATCGACGTGTTCTCGACCGATGGACAGCTCGCGCGCTTCGATCTGGTCGTGCTCGAGGACGACCGCCACTTCTTTCCCGACTATGCGGCCGTCCTCCTCGCGCGGGCATCGCTGCCCGAGCGCCTTCCCCGCACCTGGACCGCGCTGCAGCAGCGGCTGGCCGGACGCATCGACAACGCGACGATGGCCCGGCTCAACGCCGAGGTCGAGCTGGACCACCGGACCTTCGCCCAGGCCGCGGCGGCGTTTCTCGGCGACCGTGAGGCCGCTCGGCCCACTCGCCGGCGTGATCTGATCGGCGACGTGGGCAAACTGACGCTCGAGCACCTGGCCCTCGTCGCCGTTTCCCTGGTGGTCGCGGTCGCGATCGGACTGCCGCTCGGCCTCCTCGCCGCGCGCCACCGGGTCGTCGGCCAGGTCGAGCTGATGGGCATCGGCGTGCTGCAGACGATCCCGGCGCTGGCGCTGCTCGCCTTCATGATCCCGCTCTTCGGCATCGGCAAGCTGCCGGCGCTGGTGGCGCTCAGCCTCTTCGACATGGCGGCGGTGATGCGGCTCGGCCGCTGGCAGCGACTGGCCTGGATCGAGCTACCGCTGGCGTCGGTGACGATCATGGCCGGGGTCAAGACGGCCGCCGTGCTCACCGTCGGGACGGCGACGCTCGCCGCATTCATCGGCGGCGGCGGCTACGGCACGCTGATCGTCAGCGGCCTGGCGCTGAACGACGTGAGGATGATCCTGGCGGGCGCGATCCCGGCGGCGCTGATGGCGCTGGCGATCCACGTCGCGTTCGAGGCGCTCGATCGGCTCGTGGTGCCTCGACCGCTTCATGGAGCTCGCGGCACTGCTCGATGA
PROTEIN sequence
Length: 484
MTPRRLAALLAIALAALGPAAAWAATPARVGSKSFTESYVVAEIVAQVAEQVGEAPMERKLGLGGTGIAYGALASGEIDIYPEYTGTISHAILKDASVTTVDALRARLRPLGLTISDPLGFANTYALAVARDTAARLGLRTISDLARHPGLSAAFDAGFLERDDGWPGLRRHYGLQLARVIGMEHALTYQAVASGHVDVIDVFSTDGQLARFDLVVLEDDRHFFPDYAAVLLARASLPERLPRTWTALQQRLAGRIDNATMARLNAEVELDHRTFAQAAAAFLGDREAARPTRRRDLIGDVGKLTLEHLALVAVSLVVAVAIGLPLGLLAARHRVVGQVELMGIGVLQTIPALALLAFMIPLFGIGKLPALVALSLFDMAAVMRLGRWQRLAWIELPLASVTIMAGVKTAAVLTVGTATLAAFIGGGGYGTLIVSGLALNDVRMILAGAIPAALMALAIHVAFEALDRLVVPRPLHGARGTAR*