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13_1_40cm_scaffold_2156_2

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: comp(168..1364)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type branched-chain amino acid transport system, periplasmic component id=3209650 bin=GWC2_Methylomirabilis_70_24 species=Idiomarina sp. A28L genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 399.0
  • Bit_score: 586
  • Evalue 2.80e-164
livK; branched-chain amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 398.0
  • Bit_score: 586
  • Evalue 4.00e-164
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 36.1
  • Coverage: 385.0
  • Bit_score: 262
  • Evalue 2.60e-67

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Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1197
ATGACTCGCAAAGCATTCATCGGTCTCGTCGTCGTCGTTATCGTGGCTGCCGTCTTCGTGCTGATGACCGGGCCCGGCGCCGACGCCCAGGCCCCAATCCGGATTGGCGCTTCACTGTCGATCACGGGCACGTATGCAAAGCTCGGCAAGTACCAGCACGAGGGCTATCAGCTCTGCCAGAAGGATCTCAACGCCCAGGGCGGATTGCTCGGGCGCAAGATCGAGTTCGTGGTCTACGACGATCAGTCGATGCCGACCACCGGCGTCCGCCTCTACGAGAGGCTCCTCACCGAGGACATGGTCGACGTGGTGATGGGACCGTACTCCTCGCCCGTCACCGAGGCGGTGGCCAACGTGACCGAGAAGTACCGGAAGGTGATGGTGGCACCGTTGGCTGCGACGACGTCCATCTTCCGGAAGGATCCACGACGCAAATACATCTTCATGATCCTCTCGCCCGCCGAGGCCTATTTCGACGGTCTCACCGATATCGCTACGAAGCGCGGGCTCAAGACGGTAGCCGTCATCAATGAGGACACGCTCTTCTCCAAGGCCGCTGCGGCTGGCGCGGTCAATGTGGCGAGGAAGAAGGGTCTGCAGGTCGTCTTCATGGAGGCGTATCCGAAGGGCAACACGGACTTCTCCGGGCTGCTCACGAAGATCAAGGGCGCCAATCCCGACGTGATCGCCGCCGCCACCTACTTCGACGACGCGGTCGCCCTGACCCGACAGATGAGGGAGCTCAACGTCAACCCGAAGATGTACGGGGTCACGATCGGAGGTGACCTGCCGGAGTTCTACGACACGCTCAAGAGCACCGCCGAATACGTCTACGGCGCCACGCAGTGGGAGCCCATGCTCGACTACCCGGGCAACCGCGAGTTCGTCGAGGGCTACAAGGCCGAGTTCAAGCGCGAGCCATCCTACTTCGCCGCCGCGGGTTACGCGGGTTGCCTCGTCTACGCGGAGGGCGTCAAGCGCGCGGGAAGCCTCGACGCCGACAAGGTCCGCGAGCAGATCGCCAGGCTCGAGCTACGCACGCCATTCGGTGATTACAAGGTCGACCAGGACGGGGTCCAGATCGCGCACAAGATGGTCACGTTCCAGTGGCAGAAGGAAAAGAAGGTGATCGTCTGGCCCGACGATCTCGCTCAGGGCAAGGTCCTCTTCCCGACGCCGCCCTGGACGAGTCGCTGA
PROTEIN sequence
Length: 399
MTRKAFIGLVVVVIVAAVFVLMTGPGADAQAPIRIGASLSITGTYAKLGKYQHEGYQLCQKDLNAQGGLLGRKIEFVVYDDQSMPTTGVRLYERLLTEDMVDVVMGPYSSPVTEAVANVTEKYRKVMVAPLAATTSIFRKDPRRKYIFMILSPAEAYFDGLTDIATKRGLKTVAVINEDTLFSKAAAAGAVNVARKKGLQVVFMEAYPKGNTDFSGLLTKIKGANPDVIAAATYFDDAVALTRQMRELNVNPKMYGVTIGGDLPEFYDTLKSTAEYVYGATQWEPMLDYPGNREFVEGYKAEFKREPSYFAAAGYAGCLVYAEGVKRAGSLDADKVREQIARLELRTPFGDYKVDQDGVQIAHKMVTFQWQKEKKVIVWPDDLAQGKVLFPTPPWTSR*