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13_1_40cm_scaffold_2156

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2156_1
unknown

Not on your lists

2..130
DNA (129bp) protein (43aa)

This feature has no annotations

13_1_40cm_scaffold_2156_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(168..1364)
DNA (1197bp) protein (399aa)
ABC-type branched-chain amino acid transport system, periplasmic component id=3209650 bin=GWC2_Methylomirabilis_70_24 species=Idiomarina sp. A28L genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
livK; branched-chain amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
extracellular ligand-binding receptor
13_1_40cm_scaffold_2156_3
unknown

Not on your lists

comp(1455..3287)
DNA (1833bp) protein (611aa)

This feature has no annotations

13_1_40cm_scaffold_2156_4
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3534..4397)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HB37_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ETX01289.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
13_1_40cm_scaffold_2156_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4411..5820)
DNA (1410bp) protein (470aa)
h16_A2949; ABC transporter periplasmic protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
h16_A2949; ABC transporter periplasmic protein
13_1_40cm_scaffold_2156_6
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(5896..6420)
DNA (525bp) protein (175aa)
DoxX family protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CF78_THET1
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:ACZ41584.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_1_40cm_scaffold_2156_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6473..6961)
DNA (489bp) protein (163aa)
Putative uncharacterized protein id=4793468 bin=GWA2_Methylomirabilis_73_35 species=Rhodobacteraceae bacterium HTCC2150 genus=unknown taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_2156_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7688..8392
DNA (705bp) protein (235aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WKP5_VEREI
short chain dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
short-chain dehydrogenase/reductase SDR
13_1_40cm_scaffold_2156_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

8439..9179
DNA (741bp) protein (247aa)
Peptidase S1 and S6, chymotrypsin/Hap id=4062227 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
peptidase S1 and S6, chymotrypsin/Hap Tax=GWA2_Rokubacteria_70_23_curated
peptidase S1 and S6, chymotrypsin/Hap
13_1_40cm_scaffold_2156_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(9229..9480)
DNA (252bp) protein (84aa)
id=2868268 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
id=2868268 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_2156_11
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(9559..10455)
DNA (897bp) protein (299aa)
hypothetical protein id=14429739 bin=bin3_NC10 species=Desulfitobacterium hafniense genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
alpha/beta hydrolase fold protein
13_1_40cm_scaffold_2156_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(10639..12495)
DNA (1857bp) protein (619aa)
3-ketoacyl-ACP synthase III (EC:2.3.1.180) id=14625088 bin=bin7_NC10_sister species=Geodermatophilus obscurus genus=Geodermatophilus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
3-ketoacyl-ACP synthase III (EC:2.3.1.180) Tax=CSP1_6_Rokubacteria
3-ketoacyl-ACP synthase III (EC:2.3.1.180)
13_1_40cm_scaffold_2156_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12711..13457
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEQ0_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_scaffold_2156_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13513..13893
DNA (381bp) protein (127aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein id=4115223 bin=GWA2_Methylomirabilis_73_35 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_2156_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(13901..14743)
DNA (843bp) protein (281aa)
Putative carboxylesterase protein id=3355186 bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
alpha/beta hydrolase Tax=CSP1_6_Rokubacteria
alpha/beta hydrolase
13_1_40cm_scaffold_2156_16
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(14736..15101)
DNA (366bp) protein (122aa)
hypothetical protein id=14625242 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_scaffold_2156_17
unknown

Not on your lists

comp(15505..15702)
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_scaffold_2156_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

15984..16472
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=Q84CW3_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
13_1_40cm_scaffold_2156_19
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

16469..17242
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=Q84CW4_9BACT
Uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
13_1_40cm_scaffold_2156_20
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17356..18666)
DNA (1311bp) protein (437aa)
beta-lactamase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000371976D
Beta-lactamase {ECO:0000313|EMBL:KJB93805.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KAC
beta-lactamase
13_1_40cm_scaffold_2156_21
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

18789..19250
DNA (462bp) protein (154aa)
hypothetical protein id=14627300 bin=bin7_NC10_sister species=Acetobacter tropicalis genus=Acetobacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
13_1_40cm_scaffold_2156_22
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(19323..20666)
DNA (1344bp) protein (448aa)
Putative TonB-dependent receptor n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB50_9BACT
putative TonB-dependent receptor Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative TonB-dependent receptor
13_1_40cm_scaffold_2156_23
unknown

Not on your lists

20963..21202
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_scaffold_2156_24
unknown

Not on your lists

comp(21449..22003)
DNA (555bp) protein (185aa)

This feature has no annotations

13_1_40cm_scaffold_2156_25
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(22000..22548)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IR39_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB64184.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
13_1_40cm_scaffold_2156_26
unknown

Not on your lists

comp(22562..24070)
DNA (1509bp) protein (503aa)

This feature has no annotations

13_1_40cm_scaffold_2156_27
unknown

Not on your lists

24337..24597
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_scaffold_2156_28
Amycolatopsis nigrescens, Amycolatopsis, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(24573..24815)
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI000375B203
13_1_40cm_scaffold_2156_29
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(24803..26524)
DNA (1722bp) protein (574aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4W2_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ39279.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sourc
13_1_40cm_scaffold_2156_30
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26529..28130)
DNA (1602bp) protein (534aa)
N-acyl-D-amino-acid deacylase; K06015 N-acyl-D-amino-acid deacylase [EC:3.5.1.81] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
N-acyl-D-amino-acid deacylase (EC:3.5.1.81)
N-acyl-D-amino-acid deacylase id=4884113 bin=GWC2_Methylomirabilis_70_24 species=Thermotoga thermarum genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Displaying items 1-30 of 31 in total

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