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13_1_40cm_scaffold_3550_3

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: comp(2220..3326)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 361.0
  • Bit_score: 381
  • Evalue 1.80e-102
Type III effector Hrp-dependent outers id=3666471 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 366.0
  • Bit_score: 363
  • Evalue 3.60e-97
Hrp-dependent type III effector protein similarity KEGG
DB: KEGG
  • Identity: 35.2
  • Coverage: 372.0
  • Bit_score: 176
  • Evalue 1.30e-41

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1107
ATGACTCCCCCCCGCGCCGCGCTCACCATCCTCGCCGATGACCTCACCGGTGCGTGCGACACCGGGGCGCTGTTCGCCGCTAAACATCCGGTTCCGGTGACGGTTTGGCCGCGGGCGCCCGTCCCGGCGGCAGCGCGCGCCGTCGATACGGAGACTCGGGCGCTCGATGGCCCAGCGGCGGCCCAGCGCGCGGCGGAGGCGGTGGCGGCAGCGCCCGCCGCGCGAATCTTCAAGAAGATCGATTCCACGCTGCGAGGCCACGTGGGCCCCGAGGTCGACGCCCTGATCGGCGCGACCGGCGCCACGGGCGTCCTGCTGAGCCCGGCCTTCCCGGCCCGCGGCCGCACGGTGATCGAGCGCATGCTGATGATCGACGGCGTACCCATCACCGAGACCGCGTTCCAGCGCGACCCCGACCTGCCGCGCTCGGACACCGGAAACGTCGTCGACATCCTGAGACCGGTCCTCGATCGCCCGCTGGCCTGGATCCCGCTCGATCAGGTGCGCGCCGGCGTCGACGCGCTCTCGGCCCGCCTCGTGCGTTTGCGCGGCACGGTGGCCATCGCCGACGCCGAGATCGACGCCGACCTCACTGCCCTGGTGGACGCGGCGCTCGCGGTCGAGCCTTCGCCGTTGCTCGTGGGCTCGGCGGGTCTTGCCCGCGCTCTGGCGGCGCGCCTCGGGCTGCTGATCGAGCGCGTGGCGTTACCGTGCGCCAGCCGCTGGCTCATCGTCGCCGGCAGCCGTCATCCTTCAACGCGGCGGCAGATCGAGACGGCGAGGGCCGCCGGCCTTCGCGTCGTCGCGGCGTCCGAGCATCCGGAGTCTGACCGCCGGACGGTGGCGGCGCGGCTCGCGGCCGAGGCCATGCGCGCGCTCGAGCAGGAGCGGTTCGATCTCGTCGCGGTCACAGGCGGCGACACGGCCATCAGCCTCTTCGAAGCCCTGGGCGCCGAGCGCTTCGATCTCGTCGGCCCTCCCGCGCCCGGCCTGGCCTTCGGCTGGCTGCGCTCGCCGATCCACCCCGATCTGCCGGTCGTCACCAAGGCGGGCAGCTTCGGCGCACCCGATCTCTTCGTCTCGCTTCGTAACGAGGCGCTGGCGTGA
PROTEIN sequence
Length: 369
MTPPRAALTILADDLTGACDTGALFAAKHPVPVTVWPRAPVPAAARAVDTETRALDGPAAAQRAAEAVAAAPAARIFKKIDSTLRGHVGPEVDALIGATGATGVLLSPAFPARGRTVIERMLMIDGVPITETAFQRDPDLPRSDTGNVVDILRPVLDRPLAWIPLDQVRAGVDALSARLVRLRGTVAIADAEIDADLTALVDAALAVEPSPLLVGSAGLARALAARLGLLIERVALPCASRWLIVAGSRHPSTRRQIETARAAGLRVVAASEHPESDRRTVAARLAAEAMRALEQERFDLVAVTGGDTAISLFEALGAERFDLVGPPAPGLAFGWLRSPIHPDLPVVTKAGSFGAPDLFVSLRNEALA*