ggKbase home page

13_1_40cm_scaffold_3917_22

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: comp(18277..19605)

Top 3 Functional Annotations

Value Algorithm Source
rho; transcription termination factor Rho; K03628 transcription termination factor Rho Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 442.0
  • Bit_score: 801
  • Evalue 5.10e-229
rho; transcription termination factor Rho id=14625929 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 90.2
  • Coverage: 418.0
  • Bit_score: 750
  • Evalue 1.30e-213
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 413.0
  • Bit_score: 641
  • Evalue 1.80e-181

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1329
ATGAGCGCCCGCCGAGAACGAGGCCAAGGCAGCAACCCGACCGCCGAGAACGCCGCTCAGTCTTCCGCCGGAGGGATGAACCTCTCCGAGCTGAAAGAAAAGAGCATCCCCGACCTCAACGCCATCGCCCGCGACATGAACGTCCAGAATGTCGGCGGCCTGCGCAAGCAGGAGCTGATCTTCAAGATCCTTCAGTCGCAGGCCGAGAAGGACGGCCTCATCTACGCCGAAGGCGTCCTCGAGGTCCTTCCCGACGGCTTCGGCTTCCTGCGCGCGCCCGATTACAACTACCTGCCCGGCCCTGACGACATCTACGTCTCGCCCTCGCAGATCCGGCGCTTCGACCTGCGCACGGGCGACACGATCTCCGGCCAGGTCCGGCCGCCCAAGGACTCCGAGCGGTACTTCGCGCTGCTCAAGGTGGAGTCGATCAACTTCGAGGCGCCGGAAGCGGCGCGCGACAAGATTCTCTTCGACAACCTCACGCCGCTCTATCCGATGGAGCGGCTGCGCCTGGAGCATACGACGGAAAACCTGACCACGCGGGTCATGGACCTGCTGTGCCCGATCGGCAAGGGCCAGCGCGGAATGATCGTGGCCGCGCCGCGGACCGGCAAGACCATGATGCTGCAGTCCATCGCCCACGCCATTGCCGCCAATCATCCCGAGGTCTACCTCATCGTGCTGCTCATCGACGAGCGCCCGGAGGAAGTGACCGACATGCAGCGGACGGTCAAGGGTGAGGTCATCTCCTCGACCTTCGACGAGCCGCCGCAGCGTCACATCCAGGTCGCGGACATGGCCATCGAGAAGGCCAAGCGGCTCGTGGAGCACAAGCGTGACGTGGTGATCCTGCTCGACTCGCTCACGCGGTTCGCCCGGGCCCACAACGCCATCATCCCGTCGTCGGGCAAGGTGCTCTCGGGCGGCCTCGACGCCAACGCGCTGCAGCGCCCCCGCCGGTTCTTCGCGACGGCCCGTAATATCGAGGAGGGCGGCTCGCTGACGATCATGGCGACGGCGATCGTGGACACGGGCAGCCGGATGGACGACGTGATCTTCGAGGAGTTCAAGGGCACCGGCAACATGGAGGTCCACCTCGATCGTCGCTTGATGGACAAGCGCATCTTCCCCACGATCAACATCGAGCAGTCGGGCACCCGCAAGGAAGAGCTGCTCCTCGAGAAGGACGAGCTCCAGAAGGTGTGGCTGCTCCGTAAGGCCTTGTCCCAGCTCAATCCCGTCGAGGCGATGGAGCTCCTGCTCGACAAGCTCAAGCTCACGAAGACGAACAAAGAGTTCCTGGCCTCGATGCATTCGATGGGTTAG
PROTEIN sequence
Length: 443
MSARRERGQGSNPTAENAAQSSAGGMNLSELKEKSIPDLNAIARDMNVQNVGGLRKQELIFKILQSQAEKDGLIYAEGVLEVLPDGFGFLRAPDYNYLPGPDDIYVSPSQIRRFDLRTGDTISGQVRPPKDSERYFALLKVESINFEAPEAARDKILFDNLTPLYPMERLRLEHTTENLTTRVMDLLCPIGKGQRGMIVAAPRTGKTMMLQSIAHAIAANHPEVYLIVLLIDERPEEVTDMQRTVKGEVISSTFDEPPQRHIQVADMAIEKAKRLVEHKRDVVILLDSLTRFARAHNAIIPSSGKVLSGGLDANALQRPRRFFATARNIEEGGSLTIMATAIVDTGSRMDDVIFEEFKGTGNMEVHLDRRLMDKRIFPTINIEQSGTRKEELLLEKDELQKVWLLRKALSQLNPVEAMELLLDKLKLTKTNKEFLASMHSMG*