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13_1_40cm_scaffold_4035_11

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: 8616..9161

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family protein id=3960152 bin=GWA2_Methylomirabilis_73_35 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 179.0
  • Bit_score: 248
  • Evalue 6.40e-63
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWA2_Rokubacteria_73_35_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 179.0
  • Bit_score: 248
  • Evalue 8.90e-63
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 179.0
  • Bit_score: 149
  • Evalue 8.70e-34

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Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGGGAACTATGGGCGAGGAGCTCGTCCGGCGAATGGCCGCCGGCGATGGCGACGCGTTCGCCAGGTTCTACGATCGCTACTCTCCCCTGGTGTATCCGCTCATCCTTCGGATCGTCCGCGACCGTACCGACGCCGCCGACGTCTTGCAGGACGTGTTCTGGGAGACCTGGCGGTCGGCCACGACCTACGATCCTGCCCGTGGCACGCCGGAAGCCTGGGTGGTGACGCGCGCGCGCACTCGGGCAATCGATCGGGTGCGTTCCGTGCGTAGAAGAAGTGAGACGTTCGTGGCGCCCTTGGACGAGGCGATCGCCGCCGCCCCGTCGGAGACCGGGGGTGACGCCGCCGACCGCGCCTCCGATCGCTCGGTCGTCACCGGCGCGCTGGGCCGCCTTCCCGGCCCGCAGCGCGAGGTGCTCGAGCTGGCCTATTACGGCGGGCTGACCCAGACCGAGATCGCGGAGCGCATCAAGCAACCGCTCGGCACCGTGAAGACGCGGATGCGACTGGGGCTGGAGCGGCTCCGGGAGATGATGAAACGGTGA
PROTEIN sequence
Length: 182
MGTMGEELVRRMAAGDGDAFARFYDRYSPLVYPLILRIVRDRTDAADVLQDVFWETWRSATTYDPARGTPEAWVVTRARTRAIDRVRSVRRRSETFVAPLDEAIAAAPSETGGDAADRASDRSVVTGALGRLPGPQREVLELAYYGGLTQTEIAERIKQPLGTVKTRMRLGLERLREMMKR*