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13_1_40cm_scaffold_4035

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4035_1
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

1..1029
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI0003700BBD
benzoyl-CoA oxygenase subunit B Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
boxB; benzoyl-CoA oxygenase subunit B
13_1_40cm_scaffold_4035_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1032..1487
DNA (456bp) protein (152aa)
enodribonuclease L-PSP n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262650F
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_scaffold_4035_3
unknown

Not on your lists

comp(1653..2066)
DNA (414bp) protein (138aa)

This feature has no annotations

13_1_40cm_scaffold_4035_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2144..3697
DNA (1554bp) protein (518aa)
Putative benzoate-CoA ligase BzlA (Fragment) n=1 Tax=Clostridia bacterium enrichment culture clone BF RepID=D8WWP9_9FIRM
benzoate-CoA ligase family Tax=GWA2_Rokubacteria_73_35_curated
benzoate-CoA ligase family
13_1_40cm_scaffold_4035_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3697..4971
DNA (1275bp) protein (425aa)
paaK; phenylacetate-CoA ligase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Phenylacetate-CoA ligase id=4124058 bin=GWC2_Methylomirabilis_70_24 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
phenylacetate-CoA ligase
13_1_40cm_scaffold_4035_6
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4980..5816
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7TZP8_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:KFE67914.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
hypothetical protein
13_1_40cm_scaffold_4035_7
unknown

Not on your lists

5761..6000
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_scaffold_4035_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6065..6868
DNA (804bp) protein (268aa)
Methyltransferase type 11 id=2688472 bin=GWF2_Methylomirabilis_70_14 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Methyltransferase type 11 Tax=GWA2_Rokubacteria_70_23_curated
Methyltransferase type 11
13_1_40cm_scaffold_4035_9
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7016..7405)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2V9_CALAS
hypothetical protein
PPOX class probable F dependent enzyme {ECO:0000313|EMBL:KID30679.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3
13_1_40cm_scaffold_4035_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8209..8532)
DNA (324bp) protein (108aa)
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21)
Phosphoribosylaminoimidazole carboxylase ATPase subunit n=1 Tax=Rhodopirellula baltica WH47 RepID=F2AYL2_RHOBT
cupin; K11312 cupin 2 domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_scaffold_4035_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8616..9161
DNA (546bp) protein (182aa)
RNA polymerase sigma factor, sigma-70 family protein id=3960152 bin=GWA2_Methylomirabilis_73_35 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWA2_Rokubacteria_73_35_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_scaffold_4035_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9167..9952
DNA (786bp) protein (262aa)
Putative uncharacterized protein id=3960150 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative transmembrane anti-sigma factor Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_4035_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9977..10537)
DNA (561bp) protein (187aa)
NUDIX hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NUDIX hydrolase id=4492889 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NUDIX hydrolase
13_1_40cm_scaffold_4035_14
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

10572..11129
DNA (558bp) protein (186aa)
id=14626860 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
13_1_40cm_scaffold_4035_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11609..12385
DNA (777bp) protein (259aa)
phosphoadenosine phosphosulfate reductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Phosphoadenosine phosphosulfate reductase id=4097825 bin=GWC2_Methylomirabilis_70_16 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
phosphoadenosine phosphosulfate reductase
13_1_40cm_scaffold_4035_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

12476..13003
DNA (528bp) protein (176aa)
CBS domain containing protein n=1 Tax=Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) RepID=E6TUJ1_BACCJ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
CBS domain containing protein
13_1_40cm_scaffold_4035_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13008..13370)
DNA (363bp) protein (121aa)
TraR/DksA family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Transcriptional regulator, TraR/DksA family id=3708851 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_4035_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13491..14636
DNA (1146bp) protein (382aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16); K00632 acetyl-CoA acyltransferase [EC:2.3.1.16] Tax=GWA2_Rokubacteria_73_35_curated
acetyl-CoA acetyltransferase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase id=4492887 bin=GWA2_Methylomirabilis_73_35 species=Acidimicrobium ferrooxidans genus=Acidimicrobium taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_4035_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(14815..15645)
DNA (831bp) protein (277aa)
amidohydrolase 2; K07046 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
amidohydrolase 2 id=4217943 bin=GWC2_Methylomirabilis_70_16 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidohydrolase 2
13_1_40cm_scaffold_4035_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15667..17970)
DNA (2304bp) protein (768aa)
Histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Histidine kinase id=4097828 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
multi-sensor hybrid histidine kinase
13_1_40cm_scaffold_4035_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(17967..18266)
DNA (300bp) protein (100aa)
multi-sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=4492786 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 21 items

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