ggKbase home page

13_1_40cm_scaffold_414_8

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: comp(4240..5070)

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA repair protein Cflav_PD3749 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGI1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 45.0
  • Coverage: 282.0
  • Bit_score: 237
  • Evalue 2.20e-59
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphae similarity UNIPROT
DB: UniProtKB
  • Identity: 44.7
  • Coverage: 282.0
  • Bit_score: 235
  • Evalue 9.10e-59
Ku domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 281.0
  • Bit_score: 228
  • Evalue 2.20e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 831
GTGAGGCCCCTCTGGAAGGGCCTGGTCACGTTCGGGCTGGTGTCGATTCCCGTCGGCCTCTACTCGGCCACGCGTCGCCAGGCCGAGCTGCACTTCCGGCTCCTCCACGACAAGGACCAGGCGCCCATCGACTACCGGCGCTTCTGCACCGAGGAGAACGTGGAGGTCGACTGGAAGGACATCGTCAAAGGCTACGAGTACGAGAAGGGCCGGTTCGTCGTCGTGACCGACGAGGACTTCAAGCGCGCTCGCGTGCCCGGCACGCACACGATCGAGATCCGCGACTTCGTCCCCGCCGGCGACATCGACTTCGCCTTCTTCGAGACGCCGTACTGGCTCGTGCCGGATCTGCCGGGTCGCAAGGCATACGCGCTCCTGCGCGCGGCGCTCCAGGAGAGCGGCCGCGTGGGCATCGGCACCATCGTCATCCGGGAGCGCGAGCGGCTGGCCGCGCTGCAGCCGGAAGGGCCCGGCCTGATGCTCACGACGATGCGCTTCGCCGCCGAGCTCCGCGCGGCCGACGAGCTGGATATGCCCGACGAGGTGCCGCCACCGAAGAAGGAGCTGGCGCTCGCGCTCCAGCTCGTCGAGACGCTGGCCGGTCCCTTCAAGCCCGAGCAATATCACGACACCTACACCGAGGCGCTGCGCGCCGTCATCGAGGCCAAGATCGAGGGCAAGGAGGTCACCGCGCCGAAGACGAGCCGCCCGCCCAAGGTGGTCAACCTCGTCGACGCGCTGCGGAAGAGCCTGGCCACGCCGCGGGCCGCCGCGGAGCCGAAGACCGCGGTCAGGAAGCGCGGCCGACGGCGCGAAAAGAAGGCCGCCTAG
PROTEIN sequence
Length: 277
VRPLWKGLVTFGLVSIPVGLYSATRRQAELHFRLLHDKDQAPIDYRRFCTEENVEVDWKDIVKGYEYEKGRFVVVTDEDFKRARVPGTHTIEIRDFVPAGDIDFAFFETPYWLVPDLPGRKAYALLRAALQESGRVGIGTIVIRERERLAALQPEGPGLMLTTMRFAAELRAADELDMPDEVPPPKKELALALQLVETLAGPFKPEQYHDTYTEALRAVIEAKIEGKEVTAPKTSRPPKVVNLVDALRKSLATPRAAAEPKTAVRKRGRRREKKAA*