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13_1_40cm_scaffold_414

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_414_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1..171
DNA (171bp) protein (57aa)
Inner-membrane translocator id=2545761 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_scaffold_414_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

153..932
DNA (780bp) protein (260aa)
sulfate-transporting ATPase (EC:3.6.3.25)
ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter related protein id=2821356 bin=GWC2_Methylomirabilis_70_24 species=Thermobispora bispora genus=Thermobispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_scaffold_414_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

951..1658
DNA (708bp) protein (236aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family id=4820585 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
amino acid ABC transporter ATP-binding protein
13_1_40cm_scaffold_414_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1655..2278
DNA (624bp) protein (208aa)
Thiol-disulfide oxidoreductase resA id=2724803 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
alkyl hydroperoxide reductase Tax=GWA2_Rokubacteria_73_35_curated
resA; cytochrome c biogenesis protein
13_1_40cm_scaffold_414_5
unknown

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comp(2404..2625)
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_scaffold_414_6
Burkholderia dolosa, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2942..3394)
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Burkholderia dolosa AUO158 RepID=A2WJ93_9BURK
PRC-barrel domain protein
Uncharacterized protein {ECO:0000313|EMBL:EAY72039.1}; TaxID=350701 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex
13_1_40cm_scaffold_414_7
GWA2_Deltaproteobacteria_54_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3501..4280
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z8P8_9BRAD
hypothetical protein Tax=GWA2_Deltaproteobacteria_54_12_curated
hypothetical protein
13_1_40cm_scaffold_414_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(4240..5070)
DNA (831bp) protein (277aa)
Probable DNA repair protein Cflav_PD3749 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGI1_9BACT
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphae
Ku domain-containing protein
13_1_40cm_scaffold_414_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5067..6197)
DNA (1131bp) protein (377aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
eRF1 domain-containing protein id=14625459 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_414_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6194..6589)
DNA (396bp) protein (132aa)
Putative uncharacterized protein id=4099232 bin=GWC2_Methylomirabilis_70_16 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Putative uncharacterized protein Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_scaffold_414_11
unknown

Not on your lists

comp(6672..6905)
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_40cm_scaffold_414_12
unknown

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comp(7001..7252)
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_scaffold_414_13
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(7355..8401)
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000344AC2F
Ribonuclease {ECO:0000313|EMBL:GAB62220.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
ribonuclease BN
13_1_40cm_scaffold_414_14
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

8642..11446
DNA (2805bp) protein (935aa)
PAS domain S-box n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TIY4_9CYAN
PAS domain-containing protein
PAS domain S-box {ECO:0000313|EMBL:AFY82782.1}; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;"
13_1_40cm_scaffold_414_15
Cylindrospermum stagnale, Cylindrospermum, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(11443..11871)
DNA (429bp) protein (143aa)
PAS domain S-box n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9WWN0_9NOST
PAS domain S-box
PAS domain S-box {ECO:0000313|EMBL:AFZ24593.1}; TaxID=56107 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermum.;" source="Cylindrospermum stagnale PCC 7417.;"
13_1_40cm_scaffold_414_16
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(11940..13124)
DNA (1185bp) protein (395aa)
two component, sigma54 specific, Fis family transcriptional regulator id=14627680 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
two component, sigma54 specific, Fis family transcriptional regulator Tax=CSP1_6_Rokubacteria
two component sigma54 specific Fis family transcriptional regulator
13_1_40cm_scaffold_414_17
unknown

Not on your lists

comp(13310..13510)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_scaffold_414_18
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13650..14111
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NA44_KITSK
Regulator of cell morphogenesis and NO signaling {ECO:0000313|EMBL:KFE67813.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; H
hypothetical protein
13_1_40cm_scaffold_414_19
unknown

Not on your lists

14304..14975
DNA (672bp) protein (224aa)

This feature has no annotations

13_1_40cm_scaffold_414_20
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

15007..15543
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Neisseria wadsworthii 9715 RepID=G4CM88_9NEIS
putative lipoprotein Tax=RBG_16_Spirochaete_67_19_curated
13_1_40cm_scaffold_414_21
RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15654..16427)
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WUD4_GEOS8
hypothetical protein Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated
hypothetical protein
13_1_40cm_scaffold_414_trna_1
unknown

Not on your lists

comp(16593..16664)
DNA (72bp)
transferRNA
13_1_40cm_scaffold_414_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(16675..17481)
DNA (807bp) protein (269aa)
Extracellular solute-binding protein family 5 id=1884954 bin=GWA2_Methylomirabilis_73_35 species=Oceanithermus profundus genus=Oceanithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
family 5 extracellular solute-binding protein
Displaying 23 items

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