ggKbase home page

13_1_40cm_scaffold_567_22

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: comp(27832..29067)

Top 3 Functional Annotations

Value Algorithm Source
putative branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 414.0
  • Bit_score: 677
  • Evalue 1.00e-191
ABC-type branched-chain amino acid transport system, periplasmic component id=1829180 bin=GWA2_Methylomirabilis_73_35 species=uncultured organism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 414.0
  • Bit_score: 635
  • Evalue 3.20e-179
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 38.3
  • Coverage: 412.0
  • Bit_score: 262
  • Evalue 2.70e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1236
ATGAGACAGATCCTCGCGATCCTGATCGGAGTCGCGCTCGCCGCGGGCTCGGCGATGCCGGCCGCGGCGAACCACGAGATCGTCATCGGCCTGCAGTGCGACCGCACGGGCGCCACGCAGACTGTGGGCGTCAACCTGTGCCCCGGCTATCACGACTACATCAGGCTGGTGAACGCCAAGGGCGGGGTGGACGGCCACAAGATCCGGGCCGTTGAGATCGACCACGAATACAAGGTGCCGCAGGGGATGGAAGCCTACGAACGGCACAAGAAGGAAGGCGCGGTGGTGATTGGCGTATACGGCACGCCGCACATCTACGCGATGACTCAGAAGCTCACTGAAGACCGCATCCCCGGGACGTCGCCCGGCTTCGGCTCGGCCGCAGCCGCCGACGGCCAGCGCTATCCGTACATCTTTCCCATCGCCGCGACGTACTGGTCGCAGGGCGCGGCCGCGGTCGATTTCACCAAGAAGCAGCTCGGCGGCTCGCTGAAGGGCAAGAAGATCGCATATCTCTTTTTCGACAACCCCGCCGGGCGTGAGCCGATCCCTGTGATCGAGGACCTGTCGGCCAAGGAAGGCTTCCAGCTCAAGACGTTCGCGGTGCCACCGCCCGGCGTGGAGATGGGCGCCCAGGTGCTGGACATCGCCCAGCGTTACCACGCCGACTTCGTGATCGCTCACCTGTTCGGCCGATCGCCGTCGGTCTCCATCAAGGAGCTGAAGCGCGTGGGCTATCCGCTGCGCAAGGTCGTCTCGTTCGTATGGGGCTCGGCCGAGGCCGACATCGAGGCGGCCGGCGGCTGGTCGGTCGCCGAGGGCTACAACGTCATGCAGTTCGCGGGCGTCGGCACCGACTACCCGGTGCTGAACGAGATCCGCGAGATGTACAAGAAGGAGGGCAAGGAGGCGCCGAAGGAGATGGCGTCCACGGTGTACTACAACCGGGGCGTCCTCATCGCGGCGCTCCACGTCGAGGCCATCCGCAACGCGGTGAAGGGCAAGCCCGACGGCAAGATCACGGGCGAGGACGTGAAGAAGGGCTTCGAGCAGATCAACAACTTCACGCTCGGCGGACTGGTGCCGCCGCTGAAGATCACGGCGACTGACCACGAGGGCGGCGGCCTGGTCCAGATCTGGCAGGTCAAGGGTGGGAAGTTCGAGAAGCAGACGGACTGGTTCCACGCGTACGGCGACGTCGTCGCCAAGCACGTGAAGGACGCGGCCAAGAAGTAG
PROTEIN sequence
Length: 412
MRQILAILIGVALAAGSAMPAAANHEIVIGLQCDRTGATQTVGVNLCPGYHDYIRLVNAKGGVDGHKIRAVEIDHEYKVPQGMEAYERHKKEGAVVIGVYGTPHIYAMTQKLTEDRIPGTSPGFGSAAAADGQRYPYIFPIAATYWSQGAAAVDFTKKQLGGSLKGKKIAYLFFDNPAGREPIPVIEDLSAKEGFQLKTFAVPPPGVEMGAQVLDIAQRYHADFVIAHLFGRSPSVSIKELKRVGYPLRKVVSFVWGSAEADIEAAGGWSVAEGYNVMQFAGVGTDYPVLNEIREMYKKEGKEAPKEMASTVYYNRGVLIAALHVEAIRNAVKGKPDGKITGEDVKKGFEQINNFTLGGLVPPLKITATDHEGGGLVQIWQVKGGKFEKQTDWFHAYGDVVAKHVKDAAKK*