ggKbase home page

13_1_40cm_scaffold_634_16

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: comp(20914..22485)

Top 3 Functional Annotations

Value Algorithm Source
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4B5_THERP similarity UNIREF
DB: UNIREF100
  • Identity: 60.1
  • Coverage: 534.0
  • Bit_score: 586
  • Evalue 3.70e-164
4Fe-4S ferredoxin Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 523.0
  • Bit_score: 735
  • Evalue 6.90e-209
4Fe-4S ferredoxin similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 535.0
  • Bit_score: 586
  • Evalue 1.00e-164

Lists

This feature is not on any list.

Notes

Fe-S transmembrane - could be polysulfide reductase / nitrite reductase / tetrathionate reductase Cristina Butterfield (6/1/15)

Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1572
GTGCGCTACGGATTCGTGATCGATCAGCGCAAGTGCATCGGCTGTCACGCCTGCACGGTGGCGTGCAAGGAGGAGAACCAGGTTCCGCTGGGTGCGTTCCGGACGTGGGTGAAGTACGTGGAGCGAGGGACGTTCCCGAACACGCGGCGGTACTTCTCGGTCCTCCGATGTAATCACTGCGACGACGCACCGTGCGTCACGATCTGTCCGACCGTCGCGCTCTACCGAAGGCTGGACGGCGTCGTGGACTTTGACGGCGAGCGCTGCATCGGCTGCAAGTCGTGCATGCAGGCCTGTCCCTATGACGCCCTCTACATCGATCCCGCCACCCAGACCGCCGCCAAGTGCAACTATTGCGCTCATCGTCTCGAGGTCGGTCTCGAGCCCGCGTGCGTGATCGTCTGCCCCGAGCGCGCGATCATCGCCGGCGATCTCGACGATCCGCGCAGCGGCATTGCGAAGCTCGTGGCCACCGAGCAAGTGCAGGTCCGCAAGCCCGAGCAGGGGACGCGCCCGAAGGTCTTCTACCTCGGCGGCGACGCGGCGGCGCTGACGCCGTCACTCCAGGCGCCGGCCGCGACCTACATGTGGGCCCAGAGGCCGGCCGACGAGGTCTCGCTCGTCAAGATGCTGGGGAGTCTGGGCGCGTCGTCGGCGCACGGTGATGGCGCGCTCGCGCGGCCCGTGTACGACGTGCCCCACCTGGTACGTCCGTGGGGCTGGAAGGTCTCAGCCTACCTGTGGACAAAGTCGATCGCGGCCGGGGTGCTGCTCGTCGCCGCGCTCGGCGTCTTTCTCCAGCTCGCGGGCGGTGGCTGGCTCAGCGGCACCGTCGCGCCCCTGCTCGCCCTCGCGTTCCTGGCCATCACGACGAGTTTACTGGTCTTCGATCTCAAGCGGCCCGAGCGCTTTCTGTTCATCCTGCTCAAGCCGAATCCGCGCTCGTGGCTGGTGTGGGGCGGCGTCATCCTGCTCGCCTATGGCGTCGTCGCGGCGGCGTGGCTCGTCGCCGCGCGAGGCGGGGACGTCGGCGCATTACGCGTCCTGGCGCTGCCGGCCGTGCTTCTCGCCGCGGCCGCGGCCGGCTACAGCGCTTTTCTCTTCGGCCAGGCCGAGGGCCGCGACTTCTGGCAGAGCCCGCTCGTCCTGCCGCAGCTGCTCGTCTCCGCCGTCGTTGCGGGCACGGCGACGCTGCTCCTCGTCGAGGCCGTCGGCCGTCGCGATCCCGCGGCGCTGGCCGGGCTGAGCGTCTGGCTCGTCCTCGGAGTGCTCGCGCACGGCGTGGCGTTGCTGATCGAGCTCTTTGCCTATCATCCGAGCCTCGACGCCGCGAGCGCAGCCCGGCTCATCACGCGCGGCCACTACCGCGTCAGATTCTGGGCAGGCGTGATGGTGATGGGGACGATCGTGCCGGTCGCGTTGATCACCGGCTTCGCATGGACGGGGTCGCCGATAGGCGTTCCCCGGTCGACGGATATCGGCCTGCTGCTGGCGGCCGTGCTCGCGTTGGCTGGGCTGTGGCTCTGGGAGGATCTGTGGGTCAGAGCCGGCCAGTCCATACCTCTGAGCTGA
PROTEIN sequence
Length: 524
VRYGFVIDQRKCIGCHACTVACKEENQVPLGAFRTWVKYVERGTFPNTRRYFSVLRCNHCDDAPCVTICPTVALYRRLDGVVDFDGERCIGCKSCMQACPYDALYIDPATQTAAKCNYCAHRLEVGLEPACVIVCPERAIIAGDLDDPRSGIAKLVATEQVQVRKPEQGTRPKVFYLGGDAAALTPSLQAPAATYMWAQRPADEVSLVKMLGSLGASSAHGDGALARPVYDVPHLVRPWGWKVSAYLWTKSIAAGVLLVAALGVFLQLAGGGWLSGTVAPLLALAFLAITTSLLVFDLKRPERFLFILLKPNPRSWLVWGGVILLAYGVVAAAWLVAARGGDVGALRVLALPAVLLAAAAAGYSAFLFGQAEGRDFWQSPLVLPQLLVSAVVAGTATLLLVEAVGRRDPAALAGLSVWLVLGVLAHGVALLIELFAYHPSLDAASAARLITRGHYRVRFWAGVMVMGTIVPVALITGFAWTGSPIGVPRSTDIGLLLAAVLALAGLWLWEDLWVRAGQSIPLS*