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13_1_40cm_scaffold_143

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_143_1
unknown

Not on your lists

comp(3..635)
DNA (633bp) protein (211aa)

This feature has no annotations

13_1_40cm_scaffold_143_2
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(1228..2046)
DNA (819bp) protein (273aa)
id=24462979 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
id=24462979 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
13_1_40cm_scaffold_143_3
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

2221..3192
DNA (972bp) protein (324aa)
aldo/keto reductase id=24505491 bin=RBG_19FT_COMBO_GAL15_69_19 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
aldo/keto reductase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
aldo/keto reductase
13_1_40cm_scaffold_143_4
unknown

Not on your lists

3884..4030
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_40cm_scaffold_143_5
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

4167..5486
DNA (1320bp) protein (440aa)
regulatory protein id=24527940 bin=RBG_19FT_COMBO_GAL15_69_19 species=Streptomyces prunicolor genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
regulatory protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
Hypothetical protein
13_1_40cm_scaffold_143_6
unknown

Not on your lists

comp(5751..5954)
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_scaffold_143_7
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6291..7259
DNA (969bp) protein (323aa)
qor; quinone oxidoreductase (EC:1.6.5.5) id=24418282 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
qor; quinone oxidoreductase (EC:1.6.5.5) Tax=GWC2_Deltaproteobacteria_65_14_curated
qor; quinone oxidoreductase (EC:1.6.5.5)
13_1_40cm_scaffold_143_8
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

7336..8484
DNA (1149bp) protein (383aa)
diguanylate cyclase/phosphodiesterase domain 1 (GGDEF) id=24418283 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thioalkalivibrio nitratireducens genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
diguanylate cyclase/phosphodiesterase domain 1 (GGDEF) Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)
13_1_40cm_scaffold_143_9
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(8510..9445)
DNA (936bp) protein (312aa)
carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] id=24418289 bin=RBG_19FT_COMBO_GAL15_69_19 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
carboxymethylenebutenolidase
13_1_40cm_scaffold_143_10
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(9512..10510)
DNA (999bp) protein (333aa)
luciferase family protein id=24418290 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
luciferase family protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
luciferase family protein
13_1_40cm_scaffold_143_11
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

10710..12395
DNA (1686bp) protein (562aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28) id=24418291 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28) Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
cell wall hydrolase/autolysin
13_1_40cm_scaffold_143_12
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

12469..13230
DNA (762bp) protein (254aa)
hypothetical protein id=14632714 bin=bin9_gal15 species=Caldibacillus debilis genus=Caldibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
hypothetical protein Tax=CSP1_3_Armatimonadetes
beta-lactamase domain-containing protein
13_1_40cm_scaffold_143_13
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

13231..13971
DNA (741bp) protein (247aa)
ribonuclease PH (tRNA nucleotidyltransferase); K00989 ribonuclease PH [EC:2.7.7.56] Tax=RBG_16_Armatimonadetes_67_12_curated
RNAse PH; K00989 ribonuclease PH [EC:2.7.7.56] id=24418292 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
rph; ribonuclease PH
13_1_40cm_scaffold_143_14
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists


14020..14751
DNA (732bp) protein (244aa)
nucleoside-triphosphatase rdgB (EC:3.6.1.15); K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] id=24492101 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
nucleoside-triphosphatase rdgB (EC:3.6.1.15); K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
nucleoside-triphosphatase rdgB (EC:3.6.1.15)
13_1_40cm_scaffold_143_15
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(14767..17523)
DNA (2757bp) protein (919aa)
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] id=24492102 bin=RBG_19FT_COMBO_GAL15_69_19 species=Cytophaga aurantiaca genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
DNA ligase D
13_1_40cm_scaffold_143_16
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17744..19057)
DNA (1314bp) protein (438aa)
Divalent metal cation transporter MntH n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DUE9_9BACL
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; TaxID=543302 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobaci
mntH; NRAMP family Mn2+/Fe2+ transporter
13_1_40cm_scaffold_143_17
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(19457..20104)
DNA (648bp) protein (216aa)
FeoA family protein; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator id=24518456 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
FeoA family protein; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
DtxR family iron dependent repressor
13_1_40cm_scaffold_143_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20186..20572
DNA (387bp) protein (129aa)
Glyoxalase-like domain protein
Glyoxalase-like domain protein {ECO:0000313|EMBL:AHG92524.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Methylmalonyl-CoA epimerase id=4738927 bin=GWC2_Chloroflexi_49_37 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
13_1_40cm_scaffold_143_19
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(20547..21266)
DNA (720bp) protein (240aa)
hypothetical protein id=24492103 bin=RBG_19FT_COMBO_GAL15_69_19 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
hypothetical protein
13_1_40cm_scaffold_143_20
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(21329..22186)
DNA (858bp) protein (286aa)
Ku domain-containing protein; K10979 DNA end-binding protein Ku id=24492104 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Ku domain-containing protein; K10979 DNA end-binding protein Ku Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
Ku domain-containing protein
13_1_40cm_scaffold_143_21
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

22407..23000
DNA (594bp) protein (198aa)
id=24492105 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
id=24492105 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
13_1_40cm_scaffold_143_trna_1
unknown

Not on your lists

comp(23130..23197)
DNA (68bp)
transferRNA
Displaying 22 items

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