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13_1_40cm_scaffold_1710

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1710_1
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

2..256
DNA (255bp) protein (85aa)
amino acid/amide ABC transporter membrane protein 1, HAAT family id=24485414 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
amino acid/amide ABC transporter membrane protein 1, HAAT family Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
amino acid/amide ABC transporter membrane protein 1, HAAT family
13_1_40cm_scaffold_1710_2
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

352..1536
DNA (1185bp) protein (395aa)
extracellular ligand-binding receptor id=24485415 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
extracellular ligand-binding receptor Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
amino acid/amide ABC transporter substrate-binding protein, HAAT family
13_1_40cm_scaffold_1710_3
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

1639..2445
DNA (807bp) protein (269aa)
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein id=24485416 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
ABC transporter
13_1_40cm_scaffold_1710_4
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

2442..3221
DNA (780bp) protein (260aa)
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein id=24485417 bin=RBG_19FT_COMBO_GAL15_69_19 species=Truepera radiovictrix genus=Truepera taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
ABC transporter-like protein
13_1_40cm_scaffold_1710_5
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(3281..5080)
DNA (1800bp) protein (600aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] id=24485420 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
AMP-forming long-chain acyl-CoA synthetase
13_1_40cm_scaffold_1710_6
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

5146..6114
DNA (969bp) protein (323aa)
GloB; Zn-dependent hydrolases id=24485423 bin=RBG_19FT_COMBO_GAL15_69_19 species=Natronorubrum tibetense genus=Natronorubrum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
GloB; Zn-dependent hydrolases Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
Zn-dependent hydrolase
13_1_40cm_scaffold_1710_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(6558..7364)
DNA (807bp) protein (269aa)
Crp/Fnr family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Transcriptional regulator, Crp/Fnr family id=4940127 bin=GWA2_Deltaproteo_65_63 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
transcriptional regulator, Crp/Fnr family
13_1_40cm_scaffold_1710_8
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

7444..8355
DNA (912bp) protein (304aa)
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] id=24485425 bin=RBG_19FT_COMBO_GAL15_69_19 species=Anaeromusa acidaminophila genus=Anaeromusa taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41)
13_1_40cm_scaffold_1710_9
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(8387..8878)
DNA (492bp) protein (164aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] id=24485426 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RBG_16_Armatimonadetes_67_12_curated
DEAD/DEAH box helicase
13_1_40cm_scaffold_1710_10
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(8838..11792)
DNA (2955bp) protein (985aa)
putative ATP-dependent DNA helicase Lhr (EC:3.6.1.-); K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] id=24470892 bin=RBG_19FT_COMBO_GAL15_69_19 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
putative ATP-dependent DNA helicase Lhr (EC:3.6.1.-); K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
putative ATP-dependent DNA helicase Lhr (EC:3.6.1.-)
13_1_40cm_scaffold_1710_11
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(12761..13639)
DNA (879bp) protein (293aa)
ABC transporter permease; K09686 antibiotic transport system permease protein id=24470894 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ABC transporter permease; K09686 antibiotic transport system permease protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
ABC transporter permease
13_1_40cm_scaffold_1710_12
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(13644..14471)
DNA (828bp) protein (276aa)
ABC transporter permease; K09686 antibiotic transport system permease protein id=24470895 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ABC transporter permease; K09686 antibiotic transport system permease protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
ABC transporter permease
13_1_40cm_scaffold_1710_13
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(14464..15477)
DNA (1014bp) protein (338aa)
putative ABC transporter ATP-binding protein; K09687 antibiotic transport system ATP-binding protein id=14632147 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
putative ABC transporter ATP-binding protein; K09687 antibiotic transport system ATP-binding protein Tax=CSP1_3_Armatimonadetes
ABC transporter-like protein
13_1_40cm_scaffold_1710_14
CG_Caldi_01, Caldisericum, Caldisericales, Caldisericia, Caldiserica, Bacteria

Not on your lists

comp(15574..16026)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GLN2_CALEA
hypothetical protein Tax=CG_Caldi_01
hypothetical protein
13_1_40cm_scaffold_1710_15
Deinococcus maricopensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

16267..17475
DNA (1209bp) protein (403aa)
Polysaccharide deacetylase n=1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8U6N4_DEIML
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ADV66723.1}; TaxID=709986 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus maricopensi
13_1_40cm_scaffold_1710_16
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(17532..18005)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000380E034
3-demethylubiquinone-9 3-methyltransferase Tax=RBG_16_Chloroflexi_52_11_curated
3-demethylubiquinone-9 3-methyltransferase
13_1_40cm_scaffold_1710_17
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

comp(18034..18378)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82NH3_STRAW
hypothetical protein Tax=RBG_13_Chloroflexi_50_21_curated
hypothetical protein
13_1_40cm_scaffold_1710_18
Leptospira inadai, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(18410..18907)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Leptospira inadai serovar Lyme str. 10 RepID=V6HEL3_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:EQA38542.1}; TaxID=1049790 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira inadai serovar Lyme str. 10.;"
hypothetical protein
13_1_40cm_scaffold_1710_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18904..19146)
DNA (243bp) protein (81aa)
Transcriptional regulator, ArsR family n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F0M3_SORC5
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CAN91284.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" sourc
13_1_40cm_scaffold_1710_20
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(19341..20351)
DNA (1011bp) protein (337aa)
arsenite-activated ATPase ArsA Tax=RBG_16_Chloroflexi_57_11_curated
Arsenite-activated ATPase ArsA id=3704173 bin=GWA2_Methylomirabilis_73_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
arsenite-activated ATPase ArsA
13_1_40cm_scaffold_1710_21
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(20338..21267)
DNA (930bp) protein (310aa)
arsenite-activated ATPase ArsA Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
Arsenite-activated ATPase ArsA id=3704172 bin=GWA2_Methylomirabilis_73_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
arsenite-activated ATPase ArsA
13_1_40cm_scaffold_1710_22
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

comp(21360..21656)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CCQ0_DESTA
hypothetical protein Tax=RBG_13_Spirochaetes_68_11_curated
hypothetical protein
13_1_40cm_scaffold_1710_23
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(21667..21879)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CCQ0_DESTA
hypothetical protein Tax=RBG_16_Chloroflexi_63_12_curated
hypothetical protein
13_1_40cm_scaffold_1710_24
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

21978..22679
DNA (702bp) protein (234aa)
Tax=RBG_16_Chloroflexi_63_12_curated
13_1_40cm_scaffold_1710_25
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(22756..24585)
DNA (1830bp) protein (610aa)
carbon starvation protein CstA; K06200 carbon starvation protein Tax=RBG_16_Chloroflexi_57_11_curated
carbon starvation protein CstA; K06200 carbon starvation protein id=14627141 bin=bin7_NC10_sister species=Pyrobaculum neutrophilum genus=Pyrobaculum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=bin7_NC10_sister organism_group=NC10
cstA; carbon starvation protein A
13_1_40cm_scaffold_1710_26
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(24697..25104)
DNA (408bp) protein (136aa)
id=14627140 Tax=RBG_16_Chloroflexi_57_11_curated
id=14627140 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_1710_27
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

25283..25477
DNA (195bp) protein (65aa)
twin-arginine translocation protein, TatA/E family subunit; K03116 sec-independent protein translocase protein TatA id=14425957 bin=bin1_lowGC species=Desulfovibrio alkalitolerans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
twin-arginine translocation protein, TatA/E family subunit; K03116 sec-independent protein translocase protein TatA Tax=CSP1_2_Dadabacteria
13_1_40cm_scaffold_1710_28
R_Omnitrophica_44_11, Omnitrophica, Bacteria

Not on your lists

comp(25568..26209)
DNA (642bp) protein (214aa)
PA-phosphatase-like phosphoesterase
Tax=RIFCSPLOWO2_02_FULL_Omnitrophica_44_11_curated
13_1_40cm_scaffold_1710_29
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

26713..28275
DNA (1563bp) protein (521aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C639_SPHTD
peptidase S8 and S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ACZ37577.1}; Flags: Precursor;; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae;
13_1_40cm_scaffold_1710_30
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(28383..29504)
DNA (1122bp) protein (374aa)
Chromate transporter, chromate ion transporter (CHR) family n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CII0_THET1
chromate transporter chromate ion transporter (CHR) family
Chromate transporter, chromate ion transporter (CHR) family {ECO:0000313|EMBL:ACZ43551.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).
Displaying items 1-30 of 35 in total

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