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13_1_40cm_scaffold_363

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_363_1
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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245..814
DNA (570bp) protein (190aa)
xpt; xanthine phosphoribosyltransferase (EC:2.4.2.-); K03816 xanthine phosphoribosyltransferase [EC:2.4.2.22] id=14631621 bin=bin9_gal15 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
xpt; xanthine phosphoribosyltransferase (EC:2.4.2.-); K03816 xanthine phosphoribosyltransferase [EC:2.4.2.22] Tax=CSP1_3_Armatimonadetes
xpt; xanthine phosphoribosyltransferase (EC:2.4.2.-)
13_1_40cm_scaffold_363_trna_1
unknown

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comp(945..1017)
DNA (73bp)
transferRNA
13_1_40cm_scaffold_363_2
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(1232..1435)
DNA (204bp) protein (68aa)
heavy metal translocating P-type ATPase id=24451262 bin=RBG_19FT_COMBO_GAL15_69_19 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
heavy metal translocating P-type ATPase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
13_1_40cm_scaffold_363_3
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(1440..3902)
DNA (2463bp) protein (821aa)
actP; copper-transporting P-type ATPase (EC:3.6.3.4) id=24451263 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
actP; copper-transporting P-type ATPase (EC:3.6.3.4) Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
actP; copper-transporting P-type ATPase (EC:3.6.3.4)
13_1_40cm_scaffold_363_4
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(3990..4298)
DNA (309bp) protein (103aa)
hypothetical protein id=24451264 bin=RBG_19FT_COMBO_GAL15_69_19 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
hypothetical protein
13_1_40cm_scaffold_363_5
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

4742..5458
DNA (717bp) protein (239aa)
id=24451265 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
id=24451265 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
13_1_40cm_scaffold_363_6
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

5670..7301
DNA (1632bp) protein (544aa)
chaperonin GroEL; K04077 chaperonin GroEL id=24451267 bin=RBG_19FT_COMBO_GAL15_69_19 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
chaperonin GroEL; K04077 chaperonin GroEL Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
chaperonin GroEL
13_1_40cm_scaffold_363_7
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(7383..7538)
DNA (156bp) protein (52aa)
id=14632059 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
Tax=CSP1_3_Armatimonadetes
13_1_40cm_scaffold_363_8
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(7623..9296)
DNA (1674bp) protein (558aa)
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] id=24419237 bin=RBG_19FT_COMBO_GAL15_69_19 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
13_1_40cm_scaffold_363_9
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(9299..10420)
DNA (1122bp) protein (374aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] id=24419238 bin=RBG_19FT_COMBO_GAL15_69_19 species=Bacillus sp. genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
leuB; 3-isopropylmalate dehydrogenase
13_1_40cm_scaffold_363_10
unknown

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comp(10410..10562)
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_40cm_scaffold_363_11
Pyrococcus sp. ST04, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(10580..11083)
DNA (504bp) protein (168aa)
3-isopropylmalate dehydratase small subunit (EC:4.2.1.35); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] id=24419240 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate is
3-isopropylmalate dehydratase small subunit
13_1_40cm_scaffold_363_12
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(11095..12375)
DNA (1281bp) protein (427aa)
3-isopropylmalate dehydratase large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] id=24419241 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
3-isopropylmalate dehydratase large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=RBG_16_Armatimonadetes_67_12_curated
3-isopropylmalate dehydratase large subunit
13_1_40cm_scaffold_363_13
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(12380..13945)
DNA (1566bp) protein (522aa)
2-isopropylmalate synthase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] id=24419242 bin=RBG_19FT_COMBO_GAL15_69_19 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
2-isopropylmalate synthase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
2-isopropylmalate synthase
13_1_40cm_scaffold_363_14
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(13954..14976)
DNA (1023bp) protein (341aa)
ilvC; Ketol-acid reductoisomerase (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) (EC:1.1.1.86) id=24419243 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ilvC; Ketol-acid reductoisomerase (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) (EC:1.1.1.86) Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
ketol-acid reductoisomerase (EC:1.1.1.86)
13_1_40cm_scaffold_363_15
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(15031..15531)
DNA (501bp) protein (167aa)
acetolactate synthase, small subunit; K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6] id=24419244 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
acetolactate synthase, small subunit; K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
acetolactate synthase, small subunit
13_1_40cm_scaffold_363_16
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(15524..17248)
DNA (1725bp) protein (575aa)
acetolactate synthase 3 catalytic subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RBG_16_Armatimonadetes_67_12_curated
acetolactate synthase, large subunit (EC:2.2.1.6) id=24419245 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ilvB; acetolactate synthase I/II/III large subunit (EC:2.2.1.6)
13_1_40cm_scaffold_363_17
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(17847..18320)
DNA (474bp) protein (158aa)
Uncharacterized protein id=24462969 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein Tax=CSP1_2_Dadabacteria
Displaying 18 items

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