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13_1_40cm_scaffold_41

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_41_1
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

comp(96..1295)
DNA (1200bp) protein (400aa)
transposase mutator type Tax=RBG_13_Chloroflexi_53_26_curated
Transposase mutator type id=3647548 bin=GWA2_Elusimicrobia_56_46 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
transposase mutator type
13_1_40cm_scaffold_41_2

Not on your lists

1660..2202
DNA (543bp) protein (181aa)
Proton-coupled thiamine transporter YuaJ n=1 Tax=uncultured prokaryote RepID=H5SLW5_9ZZZZ
Proton-coupled thiamine transporter YuaJ {ECO:0000313|EMBL:BAL57151.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
proton-coupled thiamine transporter YuaJ
13_1_40cm_scaffold_41_3
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

2217..2855
DNA (639bp) protein (213aa)
thiN; thiamine pyrophosphokinase; K00949 thiamine pyrophosphokinase [EC:2.7.6.2] id=24429342 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
thiN; thiamine pyrophosphokinase; K00949 thiamine pyrophosphokinase [EC:2.7.6.2] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
thiamine pyrophosphokinase
13_1_40cm_scaffold_41_4
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

2964..3896
DNA (933bp) protein (311aa)
Hsp33 protein; K04083 molecular chaperone Hsp33 id=24429341 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Hsp33 protein; K04083 molecular chaperone Hsp33 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
Hsp33 protein
13_1_40cm_scaffold_41_5
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists


comp(3893..4111)
DNA (219bp) protein (73aa)
50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 id=24429340 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
50S ribosomal protein L28
13_1_40cm_scaffold_41_6
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

4213..6330
DNA (2118bp) protein (706aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] id=24429339 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
ATP-dependent DNA helicase RecG
13_1_40cm_scaffold_41_7
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

6438..6884
DNA (447bp) protein (149aa)
methyltransferase id=24429338 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
methyltransferase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
methyltransferase
13_1_40cm_scaffold_41_8
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

6881..7363
DNA (483bp) protein (161aa)
Phosphopantetheine adenylyltransferase; K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] id=24429337 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Phosphopantetheine adenylyltransferase; K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
13_1_40cm_scaffold_41_9
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

7360..7812
DNA (453bp) protein (151aa)
hypothetical protein id=24429336 bin=RBG_19FT_COMBO_GAL15_69_19 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
hypothetical protein
13_1_40cm_scaffold_41_10
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

7850..8371
DNA (522bp) protein (174aa)
hypothetical protein; K07040 uncharacterized protein id=24429335 bin=RBG_19FT_COMBO_GAL15_69_19 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein; K07040 uncharacterized protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
hypothetical protein
13_1_40cm_scaffold_41_11
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists


8403..8594
DNA (192bp) protein (64aa)
50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 id=24429334 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
ribosomal protein L32
13_1_40cm_scaffold_41_12
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

8663..9685
DNA (1023bp) protein (341aa)
phosphate acyltransferase; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] id=24429333 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfurispora thermophila genus=Desulfurispora taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
phosphate acyltransferase; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
phosphate acyltransferase
13_1_40cm_scaffold_41_13
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

9682..10704
DNA (1023bp) protein (341aa)
FabH; 3-oxoacyl-(acyl-carrier-protein) synthase III; K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] id=24429332 bin=RBG_19FT_COMBO_GAL15_69_19 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
FabH; 3-oxoacyl-(acyl-carrier-protein) synthase III; K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41)
13_1_40cm_scaffold_41_14
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

10715..11671
DNA (957bp) protein (319aa)
ACP S-malonyltransferase (EC:2.3.1.39); K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] id=24429331 bin=RBG_19FT_COMBO_GAL15_69_19 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ACP S-malonyltransferase (EC:2.3.1.39); K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
ACP S-malonyltransferase (EC:2.3.1.39)
13_1_40cm_scaffold_41_15
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

11664..12413
DNA (750bp) protein (250aa)
fabG; 3-oxoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] id=24429330 bin=RBG_19FT_COMBO_GAL15_69_19 species=Lysinibacillus fusiformis genus=Lysinibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
fabG; 3-oxoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
3-oxoacyl-ACP reductase
13_1_40cm_scaffold_41_16
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

12545..12796
DNA (252bp) protein (84aa)
acyl carrier protein; K02078 acyl carrier protein id=24429329 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
acyl carrier protein; K02078 acyl carrier protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
acpP; acyl carrier protein ACP
13_1_40cm_scaffold_41_17
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

12831..14081
DNA (1251bp) protein (417aa)
3-oxoacyl-[acyl-carrier-protein] synthase II (EC:2.3.1.179) Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
3-oxoacyl-[acyl-carrier-protein] synthase II (EC:2.3.1.179) id=24429328 bin=RBG_19FT_COMBO_GAL15_69_19 species=Brevibacillus panacihumi genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
fabF; 3-oxoacyl-ACP synthase II (EC:2.3.1.41)
13_1_40cm_scaffold_41_18
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

14068..14955
DNA (888bp) protein (296aa)
ribonuclease 3 (EC:3.1.26.3)
histidine triad (HIT) protein id=24429327 bin=RBG_19FT_COMBO_GAL15_69_19 species=Fervidicoccus fontis genus=Fervidicoccus taxon_order=Fervidicoccales taxon_class=Thermoprotei phylum=Crenarchaeota tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
histidine triad (HIT) protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
13_1_40cm_scaffold_41_19
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

14952..15464
DNA (513bp) protein (171aa)
histidine triad (HIT) protein id=24429327 bin=RBG_19FT_COMBO_GAL15_69_19 species=Fervidicoccus fontis genus=Fervidicoccus taxon_order=Fervidicoccales taxon_class=Thermoprotei phylum=Crenarchaeota tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
histidine triad (HIT) protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
histidine triad family protein
13_1_40cm_scaffold_41_20
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15516..16799
DNA (1284bp) protein (428aa)
hypothetical protein id=24429326 bin=RBG_19FT_COMBO_GAL15_69_19 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AEG13984.1}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (stra
13_1_40cm_scaffold_41_21
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(16850..18172)
DNA (1323bp) protein (441aa)
hypothetical protein id=24429324 bin=RBG_19FT_COMBO_GAL15_69_19 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
hypothetical protein
13_1_40cm_scaffold_41_22
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

18286..19230
DNA (945bp) protein (315aa)
phenylacetate-CoA oxygenase, PaaG subunit; K02609 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] id=24429323 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
phenylacetate-CoA oxygenase, PaaG subunit; K02609 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
phenylacetate-CoA oxygenase subunit PaaG
13_1_40cm_scaffold_41_23
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

19227..19757
DNA (531bp) protein (177aa)
id=24429322 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
id=24429322 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
13_1_40cm_scaffold_41_24
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

19775..20104
DNA (330bp) protein (110aa)
phenylacetic acid degradation B; K02610 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB id=24429320 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
phenylacetic acid degradation B; K02610 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
phenylacetic acid degradation B
13_1_40cm_scaffold_41_25
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

20101..20895
DNA (795bp) protein (265aa)
paaC; phenylacetic acid degradation protein; K02611 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149] id=24421939 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
paaC; phenylacetic acid degradation protein; K02611 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
phenylacetate-CoA oxygenase, PaaI subunit
13_1_40cm_scaffold_41_26
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

20865..21413
DNA (549bp) protein (183aa)
paaD; phenylacetic acid degradation protein; K02612 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD id=24421940 bin=RBG_19FT_COMBO_GAL15_69_19 species=Alicyclobacillus pohliae genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
paaD; phenylacetic acid degradation protein; K02612 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
paaD; phenylacetic acid degradation protein
13_1_40cm_scaffold_41_27
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

21441..21644
DNA (204bp) protein (68aa)
id=24421941 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
id=24421941 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
13_1_40cm_scaffold_41_28
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(22336..23349)
DNA (1014bp) protein (338aa)
id=24475225 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
id=24475225 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
13_1_40cm_scaffold_41_29
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

23522..24136
DNA (615bp) protein (205aa)
lexA; LexA repressor (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
SOS-response transcriptional repressor, LexA (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88] id=14632986 bin=bin9_gal15 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
XRE family transcriptional regulator
13_1_40cm_scaffold_41_30
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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comp(24148..24537)
DNA (390bp) protein (130aa)
id=14631532 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
Tax=CSP1_3_Armatimonadetes
Displaying items 1-30 of 62 in total

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