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13_1_40cm_scaffold_463

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_463_1
unknown

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comp(196..882)
DNA (687bp) protein (229aa)

This feature has no annotations

13_1_40cm_scaffold_463_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1002..3317
DNA (2316bp) protein (772aa)
polysaccharide export protein
Polysaccharide export protein {ECO:0000313|EMBL:AHG88395.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Periplasmic polysaccharide export protein id=7202371 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
13_1_40cm_scaffold_463_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3346..4443)
DNA (1098bp) protein (366aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJH6_IGNAJ
Lipopolysaccharide biosynthesis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
lipopolysaccharide biosynthesis protein
13_1_40cm_scaffold_463_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4458..5282)
DNA (825bp) protein (275aa)
Glycosyltransferase n=1 Tax=Pseudomonas aeruginosa BL04 RepID=U8MMC3_PSEAI
orfJ; glycosyl transferase family protein
Glycosyltransferase {ECO:0000313|EMBL:ERV82095.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginos
13_1_40cm_scaffold_463_5
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5348..6628)
DNA (1281bp) protein (427aa)
O antigen biosynthesis protein WbgV n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L4W3_ZOBGA
wbgV; O antigen biosynthesis protein WbgV
O antigen biosynthesis protein WbgV {ECO:0000313|EMBL:CAZ95802.1}; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galac
13_1_40cm_scaffold_463_6
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6625..7872)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Coriobacteriaceae RepID=UPI000377E364
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ38697.1}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psych
13_1_40cm_scaffold_463_7
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7900..8778)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IW96_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIF34998.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. C
orfJ; glycosyl transferase family protein
13_1_40cm_scaffold_463_8
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9044..10930
DNA (1887bp) protein (629aa)
asparagine synthase (EC:6.3.5.4)
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:AEB10479.1}; EC=6.3.5.4 {ECO:0000313|EMBL:AEB10479.1};; TaxID=880072 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobact
Asparagine synthetase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIK4_DESAR
13_1_40cm_scaffold_463_9

Not on your lists

10930..12003
DNA (1074bp) protein (358aa)
SAM-dependent methyltransferase, putative n=1 Tax=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) RepID=Q39TL8_GEOMG
Uncharacterized protein {ECO:0000313|EMBL:KKM94506.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SAM-dependent methyltransferase
13_1_40cm_scaffold_463_10
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

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12023..12892
DNA (870bp) protein (290aa)
Polysaccharide deactylase family protein, PEP-CTERM locus subfamily n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJI2_DESAR
polysaccharide deacetylase
Tax=BJP_IG2102_Elusimicrobia_52_42
13_1_40cm_scaffold_463_11
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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12889..13119
DNA (231bp) protein (77aa)
methylase involved in ubiquinone/menaquinone biosynthesis Tax=CG_Ignavi_02
13_1_40cm_scaffold_463_12
unknown

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13153..13572
DNA (420bp) protein (140aa)

This feature has no annotations

13_1_40cm_scaffold_463_13
Vibrio splendidus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13556..14803)
DNA (1248bp) protein (416aa)
RfaG protein n=1 Tax=Vibrio splendidus 12B01 RepID=A3UQW4_VIBSP
RfaG protein {ECO:0000313|EMBL:EAP95058.1}; TaxID=314291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio splendidus 12B01.;"
group 1 glycosyl transferase
13_1_40cm_scaffold_463_14

Not on your lists

comp(14812..16182)
DNA (1371bp) protein (457aa)
O-antigen and teichoic acid export protein id=1251294 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
O-antigen and teichoic acid export protein {ECO:0000313|EMBL:EQB64157.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
hypothetical protein
13_1_40cm_scaffold_463_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16198..16911)
DNA (714bp) protein (238aa)
Methyltransferase family protein id=1251286 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_scaffold_463_16
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(16908..17870)
DNA (963bp) protein (321aa)
transketolase subunit B (EC:2.2.1.1) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
transketolase subunit B (EC:2.2.1.1)
Putative transketolase, C-terminal section (TK) id=1251288 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
13_1_40cm_scaffold_463_17
R_Deltaproteobacteria_44_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17867..18733)
DNA (867bp) protein (289aa)
transketolase subunit A (EC:2.2.1.1) Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_16_curated
transketolase subunit A (EC:2.2.1.1)
Putative transketolase N-terminal section (TK) id=2278787 bin=GWA2_Elusimicrobia_69_24 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
13_1_40cm_scaffold_463_18
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18733..19518)
DNA (786bp) protein (262aa)
Glycosyl transferase possibly involved in lipopolysaccharide synthesis n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YHZ7_9BRAD
Glycosyl transferase possibly involved in lipopolysaccharide synthesis {ECO:0000313|EMBL:EHR04632.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiale
lipopolysaccharide synthesis sugar transferase
13_1_40cm_scaffold_463_19
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19505..20641)
DNA (1137bp) protein (379aa)
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WSK0_9BURK
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis {ECO:0000313|EMBL:EHR72931.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Bu
pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
13_1_40cm_scaffold_463_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(20625..22574)
DNA (1950bp) protein (650aa)
Polysaccharide biosynthesis protein CapD n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UJN3_ANASK
epsC; polysaccharide biosynthesis protein EpsC Tax=GWC2_Gemmatimonadetes_71_10_curated
polysaccharide biosynthesis protein CapD
Displaying 20 items

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